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6 protocols using mda 435

1

Cell lines characterization for EGFR studies

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DKMG cells were purchased from the DSMZ cell bank (Braunschweig, Germany). Lung cancer (H1299, H1975), myeloid leukemia (K562), breast cancer (MDA-435), normal breast (MCF-10A), and embryonic (HEK-293) cell lines were obtained from the ATCC. All cell lines were cultured in RPMI 1640 or DMEM medium supplemented with 10% fetal bovine serum (FBS), 2 mM L-glutamine, and 1% penicillin/streptomycin (all from Sartorius, Israel). Cells were maintained at 37 °C in humidified 5% CO2 atmosphere. H1299, H1975, and DKMG cells were characterized by cell surface overexpression of EGFR [32 (link)]. DKMG cells are known to express two forms of EGFR—wild type (WT) and another carrying a mutation in the external region of the receptor (EGFRvIII) [33 (link)]. H1975 cells carry a mutation in the internal domain of EGFR (L858R/T790M) [34 (link)].
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2

Culturing Diverse Cancer Cell Lines

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The human breast cancer cell lines BT‐474, MCF‐7, MDA‐231, MDA‐468, the melanoma‐derived cell line, MDA‐435, and the immortalized breast epithelial cell line, MCF‐10A, were purchased from ATCC. MCF‐10A cells were grown in F12/DMEM (50/50) medium, and the rest of the cells were all cultured in RPMI medium. All culture media were supplemented with 10% (v/v) fetal bovine serum (FBS) and 1% (v/v) penicillin/streptomycin antibiotics (ATCC). The human prostate cancer cell line, DU‐145, was purchased from ATCC, and was also maintained in RPMI medium supplemented with 10% FBS and 1% penicillin/streptomycin. All the cells were maintained in a humidified atmosphere at 37°C in incubators with 5% CO2. The DU‐145 cells were chosen based on our previous studies that showed the cells to be resistant to the activity of both free and encapsulated IPA‐3.18
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3

Cell Culture and Western Blot Protocol

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Human MDA-231, MDA-435, DU145, HT1080, U251, U87F-7, MCF-7 and Hs27 cell lines were from the American Type Culture Collection. MDA-231, MDA-435, and DU145 were maintained in complete RPMI 1640 and HT-1080, U251, U87, MCF-7 and Hs27 cells in DMEM supplemented with 10% fetal bovine serum, 100 IU/mL penicillin, 100 μg/mL streptomycin, 2 mmol/L l-glutamine, and 25 mmol/L HEPES buffer for RPM1 and sodium pyruvate for DMEM, respectively at 37°C in 5% CO2 incubator. For western blots, cell lysates were prepared, protein concentration was determined using Bradford reagent and equal amounts of cellular protein were loaded. For immunofluorescence, cells grown on glass coverslips were fixed with 3% paraformaldehyde and antibody-labeled as previously described [18 (link)]. Images were collected with ×60 or ×100 planapochromat objectives (numerical aperture, 1.35) of an FV1000 Olympus confocal microscope.
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Cultivation of Breast Cancer Cell Lines

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Human breast cancer cell lines MCF-7, T-47D, MDA-231 and MDA-435 were all obtained from American Type Culture Collection (Manassas, VA, USA). The cells were maintained in RPMI 1640 medium with 10% fetal bovine serum (FBS) and incubated at 37°C with 5% CO2 in a humidified atmosphere.
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5

Culturing Breast Cancer Cell Lines

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The breast cancer cell lines including MCF‐7, MDA‐231, SKBR3, MDA‐435, ZR75B and BT474 were originally purchased from American Type Culture Collection (ATCC, Manassas, VA, USA) and maintained in Dulbecco's modified Eagle's medium containing 10% foetal bovine serum, 100 units/ml penicillin and 100 μg/ml streptomycin. Hs578Bst fibroblasts were obtained from ATCC and maintained in Hybri‐Care Medium (ATCC) with 30 ng/ml EGF, 100 units/ml penicillin and 100 μg/ml streptomycin. Fibroblasts (Fbs) were generated in the conditioned medium from cocultured Hs578Bst and breast cancer cells for 3‐5 days. The cell lines were cultured in a humidified atmosphere of 95% air and 5% CO2 at 37°C.
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6

Breast Cancer Cell Line Proliferation Assay

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Breast cancer cell lines MCF7, ZR75, MDA435, MDA453, MB231, BT20, HS578T, and HCC1937 were purchased from American Type Culture Collection (ATCC) and maintained in standard conditions. Transfection was performed with Lipofectamine 2000 (Invitrogen, Carlsbad, CA) according to the manufacturer’s protocol. Targeted sequences for small interfering RNA (siRNA)-induced silencing were all listed in Supplementary Table 2.
Cell suspension (100 μL/well) was inoculated in a 96-wellplate, pre-incubated in a 37°C humidified incubator (5% CO2). After each of the 0, 24, 48, and 72 h time points, 10 μL of the CCK8 reagent from Sigma (St.Louis, MO) was added to each well of the corresponding plate. The plate was incubated for two additional hours and the 450nm absorbance was measured.
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