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Cy3 conjugated goat anti rabbit igg antibody

Manufactured by Jackson ImmunoResearch
Sourced in United States, United Kingdom, Panama

Cy3-conjugated goat anti-rabbit IgG antibody is a secondary antibody that is conjugated with the fluorescent dye Cy3. It is designed to bind to and detect rabbit immunoglobulin G (IgG) antibodies in various immunological applications, such as immunofluorescence, Western blotting, and flow cytometry.

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19 protocols using cy3 conjugated goat anti rabbit igg antibody

1

Immunofluorescent Analysis of NNV and CKB in GF-1 Cells

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GF-1 cells were first transfected with pcDNA3-CKB for two days and then infected with NNV for one day. After transfection and infection, GF-1 cells were rinsed three times with PBS and then were fixed in paraformaldehyde (4% in PBS) for 10 min at 4 °C. After fixation, the solution was replaced with buffer (0.1% Triton X-100, 4% paraformaldyhyde in PBS) for 3 min; then, the cells were washed three times with PBS and incubated with blocking buffer (5% bovine serum albumin and 5% normal goat serum in PBS) for 1 h at room temperature. The GF-1 cells were then treated with polyclonal rat anti-NNVCP antibody (1:200 in blocking buffer) and rabbit anti-Ckba (1∶500 in blocking buffer) for 2 h at room temperature. Next, the cells were washed three times with PBST (0.2% Tween-20 in PBS) and reacted with Cy3-conjugated goat anti-rabbit IgG antibodies (1∶1000 in PBS; Jackson ImmunoResearch) and anti-rat antibody (1∶1000 in PBS; Alexa flour 488) at room temperature. Counterstaining of the nucleus was performed with DAPI. After being washed three times with PBST, the cover glasses were wet mounted and the fluorescent signals were examined with a Leica TCS SP5 Confocal Spectral Microscope Imaging System.
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2

Immunofluorescent Labeling of Tubulin and Serotonin

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Samples were relaxed 10 min in cold (4°C) relaxant solution (10 mM MgCl2/5 mM NaCl/1 mM KCl/8% ethanol), fixed 30 min in 4% formaldehyde in 0.75x PBS, and rinsed in 1x PBS. Then they were permeabilized with 0.1% Triton-X in PBS (PBTx), blocked 1 h in 10% normal goat serum (NGS) in PBTx, and incubated 15–20 h at 4°C with mouse anti-acetylated-α-tubulin monoclonal antibody (T6793, Sigma, St. Louis, MO, USA) and rabbit anti-serotonin polyclonal antibodies (S5545, Sigma), both diluted 1:100 in blocking solution. Specimens were then washed in PBTx and incubated 15–20 h at 4°C in blocking solution containing Alexa-Fluor-647-conjugated goat anti-mouse IgG(H + L) antibodies (1:200, A21236, Invitrogen, Carlsbad, CA, USA) and Cy3-conjugated goat anti-rabbit IgG antibodies (1:200, 111-166-003, Jackson Immunoresearch,West Grove, PA, USA), 60 nM Alexa-Fluor-488 phalloidin (A12379, Invitrogen), and 10 μg/mL DAPI. After washing with PBTx and PBS, specimens were transferred through a graded glycerol series and mounted in 25 mM n-propyl-gallate in 75% glycerol/25% PBS.
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3

Immunofluorescence Assay for Connexin 46 Localization

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For the immunofluorescence experiments, HeLa cells were plated on 4-well chamber slides (LAB TEK, Nalge Nunc International, Naperville, IL) or glass coverslips, and grown as previously described (Berthoud et al. 2003 (link); Tong et al. 2013 (link)). The cells were transiently transfected with wild-type Cx46 or T19M using Lipofectin Transfection Reagent (Invitrogen) and PLUS Reagent (Invitrogen). Eighteen to 48 h later, cells were fixed in 4 % paraformaldehyde. After fixation, cells were subjected to immunofluorescence using rabbit anti-Cx46 antibodies and Cy3-conjugated goat anti-rabbit IgG antibodies (Jackson ImmunoResearch, West Grove, PA) as previously described (Minogue et al. 2005 (link)). Cells were examined using a Zeiss Plan Apochromat 40× objective (n.a., 1.0) in an Axioplan 2 microscope (Carl Zeiss Inc., München, Germany) equipped with a mercury lamp, and images were acquired with a Zeiss AxioCam digital camera and Zeiss AxioVision software (Carl Zeiss Inc.). Figures were assembled using Adobe Photoshop CS3 Extended (Adobe Systems Inc., San Jose, CA).
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4

Immunofluorescence Analysis of Connexin Expression in HeLa Cells

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For the immunofluorescence experiments, HeLa cells were plated on 4-well chamber slides (LAB TEK, Nalge Nunc International, Naperville, IL) or glass coverslips, and grown as previously described (Berthoud et al. 2003 (link); Tong et al. 2013 (link)). The cells were transiently transfected with wild-type Cx46 or T19M using Lipofectin Transfection Reagent (Invitrogen) and PLUS Reagent (Invitrogen). Eighteen to 48 h later, cells were fixed in 4 % paraformaldehyde. After fixation, cells were subjected to immunofluorescence using rabbit anti-Cx46 antibodies and Cy3-conjugated goat anti-rabbit IgG antibodies (Jackson ImmunoResearch, West Grove, PA) as previously described (Minogue et al. 2005 (link)). Cells were examined using a Zeiss Plan Apochromat 40× objective (n.a., 1.0) in an Axioplan 2 microscope (Carl Zeiss Inc., München, Germany) equipped with a mercury lamp, and images were acquired with a Zeiss AxioCam digital camera and Zeiss AxioVision software (Carl Zeiss Inc.). Figures were assembled using Adobe Photoshop CS3 Extended (Adobe Systems Inc., San Jose, CA).
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5

Serotonergic Neuron Visualization in Whole-Mount Tissue

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The fixed ganglia were whole-mount stained with a polyclonal rabbit anti-serotonin antiserum (Sigma; 1 : 4000) and Cy3-conjugated goat anti-rabbit IgG antibodies (Jackson ImmunoResearch; 1 : 200) following the protocol of Ott [43 (link)] with some modifications. Stacks of confocal images were captured with a 10× objective (NA 0.4, pin hole size 1.0 AU). See the supplemental methods in the electronic supplementary material for details and validation of the specificity of the immunostaining. We calculated the theoretical optical slice thickness (full width at half maximum, FWHM) following [44 ]: which gives FWHM = 14.25 µm with emission wavelength λem = 570 nm, refractive index n = 1.52, numerical aperture NA = 0.4 and a back-projected object-side pinhole diameter PH = 2 µm. Assuming that the z-resolution in whole-mounted tissue is 1.5× lower (FWHM approx. 21 µm), we acquired confocal sections at a mechanical z-step of 7 µm to give an optical inter-slice distance of 11 µm [45 (link)] so that adjacent confocal sections overlap by an estimated 50% FWHM.
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6

Immunofluorescence Analysis of Cx50 Distribution

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Cells were grown on glass coverslips until they reached ~ 80% confluence. Then, they were fixed in 4% paraformaldehyde in phosphate buffered saline pH 7.4 (PBS) for 15 min and subjected to immunofluorescence using previously characterized rabbit polyclonal anti-Cx50 antibodies [62 (link)] and Cy3-conjugated goat anti-rabbit IgG antibodies (Jackson ImmunoResearch, West Grove, PA, USA). The cellular distribution of Cx50 was studied with a Zeiss Plan Apochromat 40× objective (n.a., 1.0) in an Axioplan 2 microscope (Carl Zeiss, Munich, Germany) equipped with a mercury lamp. Images were acquired with a Zeiss AxioCam digital camera using Zeiss AxioVision software, keeping light intensity and exposure time constant for all images within an experiment. Figures were generated in Adobe Photoshop 23.5.5 (Adobe Systems, Inc., San Jose, CA, USA).
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7

Histological and Immunological Analysis of Aortic Dissection

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For histological analyses, AD tissues were fixed in 4% paraformaldehyde, paraffin-embedded, and sliced into 5-µm-thick tissue sections with circumferential orientation. Sections of aortic tissue were stained with hematoxylin and eosin (H&E), and elastica van Gieson (EVG) staining.
Immunofluorescence staining of the aortic tissue was performed using antibodies for STAT3 phosphorylated at Tyr705 (P-STAT3, Cell Signaling Technologies #9145, Danvers, MA, USA) with a TSA labeling kit with AlexaFluor 488 tyramide (Thermo Fisher Scientific #T-20922, Waltham, MA, USA), NFκB (Abcam, #ab13594, Cambridge, UK) with Cy3-conjugated goat anti-rabbit IgG antibody (Jackson ImmunoResearch Laboratories #111-115-144, West Grove, PA, USA), and TOPRO-3 (Thermo Fisher Scientific #T3605, Waltham, MA, USA) for nuclear staining. Immunohistochemical staining of AD tissue for P-STAT3 (Cell Signaling Technologies #9145), and neutrophils (neutrophil elastase, Dako #M0752, Santa Clara, CA, USA) were also performed using avidin-biotin complex staining kits (Vectastain #PK-4001 and #PK-4002, Vector Labs, Burlingame, CA, USA) according to the instructions from the manufacturer.
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8

In Situ Analysis of Papp-aa Expression

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A DNA fragment encoding part of Papp-aa sequence was amplified using primers in Supplementary file 1. The PCR product was cloned in pGEM-T easy plasmid. The Digoxygenin-UTP labeled sense and antisense riboprobes were synthesized as previously reported (Wang et al., 2009 (link)). Zebrafish larvae were fixed in 4% paraformaldehyde, permeabilized in methanol, and analyzed by whole mount immunostaining or in situ hybridization analysis as described previously (Dai et al., 2014 (link)).
For double color in situ hybridization and immunostaining, papp-aa mRNA signal was detected using an anti-DIG-POD antibody (Roche), followed by Alexa 488 Tyramide Signal Amplification (Invitrogen). After in situ hybridization analysis, the stained larvae were washed in 1xPBST then incubated with a GFP antibody overnight at 4°C. Larvae were then stained with a Cy3 conjugated Goat anti-Rabbit IgG antibody (Jackson ImmunoResearch, West Grove, PA). Images were acquired using a Nikon Eclipse E600 Fluorescence Microscope with PMCapture Pro six software.
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9

Visualizing Microglial Structural Changes

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Structural changes of microglial cells were visualized by ionized calcium-binding adapter molecule 1 (Iba-1) immunohistochemistry. Iba-1 is a protein that is expressed in microglia and is upregulated under painful conditions30 (link). The sections were first incubated in 10% Roti-block (CARL ROTH, Germany) at room temperature for 1 h followed by rabbit anti-Iba-1 polyclonal antibody (1:1000; ABCAM, United Kingdom) at room temperature for 16 h. Later, sections were incubated in secondary antibodies, Cy3—conjugated goat-anti-rabbit IgG antibody (1:500; JACKSON IMMUNORESEARCH, USA) at room temperature in darkness for 4 h. Tissues were washed 3 times in PBS for 5 min each and mounted with Roti mounting medium (CARL ROTH, Germany).
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10

Immunohistochemical Analysis of Synaptic Proteins

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Immunohistochemistry has been performed as previously described [13 (link)]. Briefly, cultured neurons were fixed with 4% paraformaldehyde solution and subjected to immunostaining without permeabilization. The following antibodies were used: polyclonal anti-GluN1 (extracellular) antibody (#AGC-001, alomone labs, Jerusalem, Israel), polyclonal anti-GluA1 (extracellular) antibody (#AGC-004, alomone labs), Cy™3-conjugated goat anti-rabbit IgG antibody (#111–165-003, Jackson ImmunoResearch Lab, West Grove, PA).0Images were acquired by using confocal microscope (Zeiss 710, Carl Zeiss, Oberkochen, Germany) and analyzed by using NIH ImageJ software (ver. 1.47v). All procedures of image acquisition and analysis were performed by experimenters blind to experimental condition.
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