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14 protocols using bio spectrum gel imaging system

1

Western Blot Protein Analysis

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Total protein was extracted by radio-immunoprecipitation assay lysis buffer containing phenylmethanesulfonyl fluoride (Beyotime, Beijing, China). The protein concentration was determined by standard bicinchoninic acid assay. An equal amount of protein (50 µg) was subjected to 10% SDS-PAGE and then transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA) after electrophoresis. The PVDF membranes were incubated with Tris-buffered saline Tween-20 (Boster, Wuhan, China) containing 5% skim milk at room temperature to block nonspecific binding. Membranes were then incubated with primary antibodies (Table 2) overnight at 4°C and incubated with rabbit anti-mouse secondary antibody for 1 hour at room temperature. Protein bands were visualized by enhanced chemiluminescence and imaged using a BioSpectrum gel imaging system (Bio-Rad, Hercules, CA, USA).
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2

Standardized Western Blot Analysis

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Western blot analysis was carried out according to a standard protocol. Cell lysates were generated from cultured cells with RIPA lysis buffer containing protease inhibitors (Roche). The protein concentration was determined by using a Bradford kit (Pierce, Thermo Fisher Scientific). Equal amounts of total protein were loaded, separated by SDS‐PAGE and then transferred to PVDF membranes (Bio‐Rad). After blocking in 5% nonfat milk, the membranes were incubated overnight at 4°C with appropriate primary antibodies and then with secondary antibodies conjugated to horseradish peroxidase for 2 h at room temperature. After washing, the bands of interest were analyzed by using an ECL kit. Images were acquired using the Bio‐Spectrum Gel Imaging System (Bio‐Rad). Then, quantification of the Western blot results was performed using Image Lab software, and the bands were normalized with GAPDH as the internal control.
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3

Western Blot Analysis of Exosomal Markers

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The extraction of the total protein was performed via radio-immunoprecipitation assay lysis buffer embodying phenylmethylsulfonyl fluoride (Beyotime Institute of Biotechnology, Shanghai, China). The protein level in the supernatant was detected via the BCA method. Equal volumes of protein (50 mg) were separated via SDS-PAGE (10% gel) and then transferred onto the polyvinylidene fluoride (PVDF) membrane (EMD Millipore). The PVDF membranes were incubated with tris-buffered saline tween (TBST; Boster Biological Technology Co., Ltd.) supplemented with 5% skimmed milk to block the non-specific binding. Next, the membranes were cultured with the primary antibodies (Table 1) at 4°C overnight, together with rabbit anti-rat secondary antibody for 1 h at room temperature. The proteins were developed in enhanced chemiluminescence reagent, and analyzed by BioSpectrum gel imaging system (Bio-Rad Laboratories, Inc.).

Antibodies for Western Blot Analysis

AntibodyNo., CompanyDilution Ratio
Alixab117600, Abcam1: 100
CD63ab217345, Abcam1: 100
CD9ab92726, Abcam1: 100
CD81ab79559, Abcam1: 5000
GAPDHab181602, Abcam1: 50
β-actinab179467, Abcam1: 5000
Cleaved caspase-3ab2302, Abcam1:50
Cleaved PARPab32064, Abcam1: 5000
Secondary antibodyab150117, Abcam1: 5000

Abbreviations: GAPDH, glyceraldehyde-3-phosphate dehydrogenase; PARP, poly (ADP-ribose) polymerase; Abcam, Abcam Inc., Cambridge, MA, USA.

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4

Western Blot Analysis of Hepatic Proteins

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Protein extracts of liver tissues were loaded on sodium dodecyl sulfate–polyacrylamide gels and transferred to polyvinylidene difluoride membranes (EMD Millipore, Burlington, MA, USA) after electrophoresis. Protein concentration was determined with a bicinchoninic acid protein assay kit (Beyotime Biotechnology, Shanghai, China). The proteins were marked with anti-Connexin 43 (Cell Signaling Technology; Danvers, Massachusetts, USA, #3512S, 1:1,000), N-cadherin (Cell Signaling Technology; Danvers, Massachusetts, USA, #13116S, 1:1,000), GAPDH (Cell Signaling Technology; Danvers, Massachusetts, USA, #2118s, 1:1,000), TOM20 (Proteintech; Wuhan, China, #11802-1-AP, 1:1,000), or collagen I (Abcam; Cambridge, CB2 0AX, UK, #ab117119,1:1,000). Enhanced chemiluminescence was used for final detection. Secondary antibodies were used at a dilution of 1:10,000. Gels were imaged using a Bio-Spectrum Gel Imaging System (Bio-Rad Laboratories, Hercules, CA, USA), and band intensity was measured with Photoshop CS6 software (Adobe, San Jose, CA, USA). Cx43 protein bands were normalized to TOM2. Mitochondria from LX-2 cells were collected with a mitochondria isolation kit (Beyotime Biotechnology, Shanghai, China).
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5

Protein Expression Analysis of VSMCs and HUVECs

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The VSMCs and HUVECs were grown in the 6-well plate. Total proteins were extracted by radioimmunoprecipitation assay buffer lysis buffer containing phenylmethanesulfonylfluoride or phenylmethylsulfonyl fluorid (Beyotime, Beijing, China). Bicinchoninic acid assay (BCA) assay was used to determine supernatant protein levels. Then, sodium dodecyl sulfate (SDS) loading buffer was added for 5 minutes denaturation at 95°C. Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was conducted before transferring membrane, followed by the addition of 5% skim milk for closure overnight at 4°C. After membrane washing with Tris-HCl buffer solution-Tween (TBST), the primary antibodies including PI3K, Akt, mTOR, phosphorylated-PI3K (p-PI3K), phosphorylated-Akt (p-Akt) phosphorylated-mTOR (p-mTOR), bcl-2, and internal reference β-actin (all were purchased from CST Company, USA) were added respectively and incubated overnight at 4°C. Then membranes were washed with TBST and the marked secondary antibody horseradish peroxidase (HRP) was added to incubate for 1 hour at room temperature. The protein bands were revealed by electrochemiluminescence (ECL) method and imaged using a BioSpectrum Gel Imaging System (Bio-Rad, Hercules, CA).
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6

Western Blot Analysis of Protein Levels

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Cells were collected and lysed with RIPA buffer containing a fresh protease inhibitor mixture (50 μg/mL aprotinin, 0.5 mM phenylmethanesulfonyl fluoride (PMSF), 1 mM sodium orthovanadate, 10 mM NaF, and 10 mM glycerol phosphate). Protein concentrations were quantified using BCA assay kit. Equal amounts of proteins were separated by SDS-PAGE (12%) and electrotransferred onto nitrocellulose membranes. The membranes were blocked with 5% nonfat milk in TBST buffer (20 mM Trisbuffered saline and 0.5% Tween 20) for 1 h at room temperature followed by incubation with the corresponding primary antibodies overnight at 4 °C. Primary antibodies are listed in Table S5. After washing with TBST buffer, secondary antibodies were used at 1:2000 dilutions for 1 h at room temperature. Protein detection was performed based on an enhanced chemiluminescence (ECL) method and photographed by using a BioSpectrum Gel Imaging System (Bio-Rad, Hercules, USA).
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7

Western Blotting Quantification of TS in Brain

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The expression of TS in brain tissue was determined by Western blotting [48 (link)]. RIPA lysate was added to lyse the brain tissue cells and centrifuged at 14,000× g for 5 min after being processed by an ultrasonic disintegrator. A total of 10μL supernatant was diluted 10 times with PBS, and used a bicinchoninic acid (BCA) protein quantitative kit (Shandong Sparkjade Biotechnology Co., Ltd., Dongying, China) for protein quantification. SDS-PAGE was added to the same amount of protein and heated at 100 °C for 5–10 min. The protein was loaded on a 12% PAGE gel, separated in an electric field, and transferred to a PVDF membrane. The membrane was blocked with BSA for 1 h at room temperature. Then, the primary antibody was incubated and placed on a shaker overnight at 4 °C. After washing with TBST, the secondary antibody was incubated for 1 h at room temperature. Finally, the chemiluminescence reagent ECL was added, and the band was exposed to a Bio-Spectrum Gel Imaging System (Bio-Rad, Hercules, CA, USA) for photographing. The optical density was analyzed by Image J software, and the intensity of each protein band was normalized to the respective β-actin band.
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8

Angptl7 Regulation of Endothelial Function

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The Western blotting was performed to detect the protein levels according to previous investigation (Pan 2017 ). An-gptl7 transfected and un-transfected HUVEC were treated with TNF-α (40 ng/ml) for 48 h with a density of 8×10 5 cells/ well in 6-well plates. The following antibodies were used: Angptl7, eNOS, NF-κB, Nrf-2, HO-1, GAPDH, and HRPconjugated secondary antibodies. The immune-blotting was visualized using BioSpectrum Gel Imaging System (Bio-Rad, USA) and analyzed by Image J 1.8.0.
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9

Protein Quantification and Western Blot Analysis

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The total protein was extracted using radioimmunoprecipitation assay lysis buffer containing phenylmethylsulfonyl fluoride (Beyotime, Shanghai, China) and protein levels in the serum were determined using the bicinchoninic acid kit. Next, an equal amount (50 mg) of protein was loaded into 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis, and then moved onto polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA) which were subsequently incubated at room temperature with tris-buffered saline tween (Boster, Wuhan, Hubei, China) containing 5% skim milk for the prevention of nonspecific binding. Afterward, the membranes were incubated at 4° C overnight with primary antibodies (all from Abcam) (Table 2), and subsequently with rabbit anti-rat secondary antibody for 1 h at room temperature. The protein was developed with an enhanced chemiluminescence reagent and visualized with a BioSpectrum gel imaging system (Bio-Rad, Hercules, CA, USA).
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10

Comprehensive Protein Extraction and Western Blot Analysis

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The total proteins were extracted by radio-immunoprecipitation assay lysis buffer containing phenylmethylsulfonyl fluoride (Beyotime Biotechnology Co., Ltd, Shanghai, China) and protein level in the supernatant was then determined using the BCA method. Equal protein samples (50 mg) were loaded onto 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis and then transferred onto polyvinylidene fluoride (PVDF) membranes (Millipore, Billerica, MA, USA). After that, PVDF membranes were incubated at room temperature with tris-buffered saline tween (Boster Biological Technology Co., Ltd, Wuhan, Hubei, China) containing 5% skim milk to block nonspecific binding. Subsequently, the membranes were cultured with primary antibodies at 4 °C overnight, and then with secondary antibodies for 1 h at room temperature. At last, the proteins were colored in enhanced chemiluminescence reagent, and visualized with BioSpectrum gel imaging system (Bio-Rad, Hercules, CA, USA). All antibodies were shown in Table 2.

Antibodies for western blot assay.

AntibodyNo., companyDilution ratio
CD63ab217345, Abcam1:1000
CD9ab92726, Abcam1:2000
Calnexinab22595, Abcam1:2000
α-SMAab5694, Abcam1:1000
OCNAB10911, Sigma-Aldrich1:1000
GDF-10ab235005, Abcam1:1000
FGF-205-118, Sigma-Aldrich1:1000
VapBab241298, Abcam1:2000
GAPDHab8245, Abcam1:1000
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