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4 protocols using sc 1504

1

Visualizing T Cell Migration Across Endothelium

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CFSE-stained T cells (5 × 104 cells per transwell) migrated for 4 h across endothelial monolayers to CCL19 (0.5 μg ml−1), fixed for 20 min at 4 °C with 4% (w/v) paraformaldehyde (Affymetrix), and paraformaldehyde then neutralized for 10 min at 4 °C with PBS 0.1 M glycine (Sigma-Aldrich), pH 7.4. Cells were permeablized with PBS 0.2% (v/v) Triton X-100 (Sigma-Aldrich), stained for 30 min at 4 °C with Alexa fluor 555-phalloidin (Life Technologies) and washed with PBS containing 0.2% (v/v) Triton X-100 followed by PBS alone. In some experiments cell layers were also stained with polyclonal goat anti-VCAM-1 at 2 μg ml−1 (sc-1504, Santa Cruz) and detected with Donkey anti-goat Alexa Fluor 647 at 5 μg ml−1 (Jackson Immunoresearch, 705-606-147). Transwell membranes were transferred onto glass slides and visualized by confocal microscopy (Zeiss LSM 510 Meta, and LSM5 Duo) with a × 63 or × 40 objective, respectively. Z-stack images were acquired every 1 μm with 2-μm slice thicknesses for examination of in vitro endothelial monolayers. Images were analysed with Volocity version 6.1.1 software (Perkin Elmer).
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2

Quantification of HO-1 and VCAM-1 Proteins

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We separated HUVEC or cytotrophoblast protein lysates (20 μg) on 10% polyacrylamide gels with wet transfer to PVDF membranes (Millipore, Billerica, MA). We blocked membranes prior to incubation overnight with the primary antibody (Either anti-HO-1 at 1:500 dilution (ADI-SPA-896 (ENZO Life Sciences, Farmingdate, New York) or anti-VCAM 1 at 1:200 dilution (SC-1504), Santa Cruz, Biotechnology, Dallas, Texas)). We assessed heme‑oxygenase 1 (HO-1) by blocking blots with 5% skim milk followed by incubation with primary rabbit anti-HO-1 antibody (1:500) overnight at 4 °C, and incubated them with secondary anti-rabbit-HRP antibody for 1 h at room temperature. We examined vascular cell adhesion molecule 1 (VCAM 1) by blocking protein blots with 5% skim milk, followed by incubation with primary goat anti-VCAM 1 antibody (1:200) in Canget 1 overnight at 4 °C then incubated with secondary anti goat-HRP antibody for 1 h at room temperature. We applied ECL prime reagent (GE healthcare Life Sciences, Pittsburgh, PA) and immune-reactive bands were visualized using a Chemidoc XRS (BioRad, Hercules, CA). We stripped blots with Restore Western Blot Stripping Buffer (Thermo Fisher Scientific, Waltham, MA) and re-probed it with mouse anti-B-actin (1:10,000) antibody overnight at 4 °C for the protein loading control.
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3

Immunohistochemical Analysis of NIK and VCAM-1

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IHC was performed on the OCT sections using VECTASTAIN Elite ABC Kit (Vectorlabs). Briefly, air-dried slides were fixed in methanol containing 0.3% H2O2 for 10 min at -20°C, then serum-blocked for 20 min at room temperature, followed by antibodies incubation overnight at 4°C. Slides were washed three times with 1X PBS, then conjugated with secondary antibody and incubated for 1 hour at 37°C. After washing 3 times with PBS for 5 minutes, the tissues were stained with ABC reagent and DAB substrate according to manufacturer’s protocol. Slides were counterstained with hematoxylin. The antibodies were against NIK (Santa Cruz, sc-7211, 1:100), and VCAM-1 (Santa Cruz, sc1504, 1:100). We assessed the staining intensity with blinded genotype and treatment. Quantification was performed using the integrative optical density function in Image-Pro software.
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4

Histological Analysis of Lung Inflammation

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Following BAL, the right lung lobes were fixed at 20 cmH 2 O with 10% buffered formalin, paraffin-embedded and cut into 4 µm sections. Sections were stained with hematoxylin and eosin [6] for scoring of pulmonary inflammatory cell infiltration and alveolar wall thickening using a semiquantitative score (0-3) on blinded, randomly selected images by two independent investigators [14] .
Similarly, formalin-fixed, paraffin-embedded sections were labelled with vascular cell adhesion molecule (VCAM)-1 antibody (C-19, Santa Cruz (sc-1504), 10 μg/ml) or PECAM-1 (M-20, Santa Cruz (sc-1506), 0.2 μg/ml) and counterstained with hematoxylin before visualisation by an Olympus BX45 microscope linked to a XC10 camera. Five images were collected per sample and were assessed using a semiquantitative score as above for intensity (0-3) and density of staining (0-3), on blinded sections by two independent investigators. To ensure specificity of the immunohistological staining reactions, consecutive sections were incubated in the absence of the primary antibody.
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