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89 protocols using kn 93

1

Simulating Pressured Periodontium in OTM

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The PDLtms were randomly assigned into three groups, i.e., the control group, the compression group (Cg) and the compression+KN-93 (an inhibitor of the CAMK II pathway) group (CKg). To simulate the pressured periodontium in OTM, a modified “weight” method was used. Briefly, a cover glass and a bottle of granules were placed on the PDLtm to produce a compression of 25 g/cm2, which has been proved to be the optimal force level for this model18. In the compression+KN-93 group, 0.01 mM KN-93 (Sigma) was added to the media to suppress the CAMK II pathway.
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2

Astrocyte and U251 Cell Culture Protocols

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Astrocyte-enriched cultures were generated from newborn CD1 Swiss mice and maintained in culture as previously described [28 (link)]. Generation/maintenance of U251 cell lines expressing wild type (MLC1-WT) or mutated MLC1 (MLC1-S280L) has been previously described [20 (link)]. Cell treatments were performed in serum-free (SF) medium, as follows: 5 min with adenosine triphosphate (ATP, 100 µM, Sigma-Aldrich, Saint Louis, MO, USA), 30 min with isotonic solution (140 mM NaCl, 5 mM KCl, 2 mM MgCl2, 2 mM CaCl2, 20 mM D-glucose, 5 mM HEPES, pH 7.4) or hypotonic solution prepared by adding 30% distilled water to the isotonic solution (Hypo) [29 (link)]. For high K+ stimulation, cells were treated for 30 min with the same isotonic buffer, with the KCl concentration increased up to 60 mM (HK), as previously described [30 (link)]. For CaMKII inhibition U251 MLC1-WT cells and mouse astrocytes were treated for 15 min with 10 µM of KN93 (10 µM, Sigma-Aldrich, Saint Louis, MO, USA) in isotonic solution or co-stimulated for 15 min with 10 µM KN93 in hypotonic solution. Cycloheximide (CHX) treatment (100 µg/mL, Sigma-Aldrich) was maintained for 1, 3, 4, or 5 h.
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3

Osteoclast Differentiation and KN93 Treatment

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Cell culture and KN93 treatment. The murine monocyte/macrophage RAW 264.7 cell line was obtained from the American Type culture collection (Manassas, VA, USA). The cells were incubated in Dulbecco's modified Eagle's medium (GE Healthcare, chicago, IL, USA) containing 10% fetal bovine serum (FBS; GE Healthcare), 2 mM/l L-glutamine, 100 U/ml penicillin and 100 µg/ml streptomycin at 37˚C in a humidified atmosphere of 5% CO 2 . In order to induce osteoclast differentiation, RAW264.7 cells were resuspended in minimum essential medium (MEM)-α (GE Healthcare) and seeded into 6-well plates (5x10 4 cells/ml) and cultured for 4 h at 37˚C in a humidified atmosphere of 5% CO 2 . The medium was changed to MEM-α containing 25 ng/ml M-cSF + 30 ng/ml RANKL (PeproTech, Inc., Rocky Hill, NJ, USA) + dimethyl sulfoxide [(dMSO); control, KN93 was dissolved in dMSO), 25 ng/ml M-cSF + 30 ng/ml RANKL and 25 ng/ml M-cSF + 30 ng/ml RANKL + 10 µM KN93 (Sigma-Aldrich; Merck KGaA, darmstadt, Germany) + dMSO. The cells were cultured for an additional 4 days.
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4

Angiotensin II-induced Cardiomyocyte Signaling

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Ang II, N-acetyl-L-cysteine (ROS scavenger), irbesartan (angiotensin receptor blocker), STO-609 (CaMKK inhibitor), compound C (AMPK inhibitor), KN-93 (CaMKII inhibitor), fluo-3 AM, 2′,7′-dichlorofluorescein diacetate (DCFDA), L-ascorbic acid, Claycomb medium, norepinephrine, gelatine, fibronectin, and monoclonal anti-β-actin antibody were purchased from Sigma Chemical Company (St. Louis, MO, USA). Monoclonal antibodies against ACC, CaMKII and CaMKIIδ and polyclonal antibodies against AT1R, TGF-β1, phosphorylated ACC, and phosphorylated CaMKII were purchased from Abcam (Cambridge, MA, USA). Monoclonal antibodies against NF-κB, phosphorylated JNK and AMPKα, and polyclonal antibodies against JNK and AMPKα were obtained from Cell Signaling Technology (Danvers, MA, USA). Foetal bovine serum (FBS), L-glutamine, and penicillin-streptomycin were acquired from Thermo Fisher Scientific (Foster City, CA, USA).
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5

Intracellular Calcium Imaging in Cardiomyocytes

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To measure intracellular Ca2+, cells were loaded with 5 μM Fluo-4 AM (ThermoFisher Scientific, Waltham, MA) for 20 minutes and washed three times and maintained in the following solution (in mM): NaCl 125, KCl 4.75, MgSO4 1.2, KH2PO4 1.2, HEPES 30, glucose 10, taurine 50, CaCl2 2 and pH = 7.4. A Leica TCS SP2 confocal microscopy with 40x, 1.25 NA oil immersion objectives was used for linescan imaging. The scan zoom was adjusted to fit the cells, and scan line was performed along the long axis of cells49 . The excitation for Fluo-4 was 488 nm, while emission was collected at 505–530 nm. For Ca2+ sparks recording, cells were scanned at 400 Hz for 20 s following 1 minute of pacing at 3 Hz. Ca2+ sparks detection and analysis was performed as previously described49 50 (link)51 (link). KN-93 was purchased from Sigma-Aldrich (St. Louis, MO). For simultaneous recording of Ca2+ transient amplitudes and SR Ca2+ contents, cells were exposed to 10 mM caffeine immediately following termination of pacing at 1 Hz for 1 minute. Sampling started 10 s before caffeine treatment.
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6

Spontaneous After-Contractions in Paced Myocytes

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Rod-shaped quiescent LV and RV myocytes were paced at 2 Hz in the presence of 1 µmol/L isoproterenol in 1.8 mmol/L Ca-Tyrode’s solution at room temperature. After stimulating the myocytes for a short time, pacing was stopped and spontaneous after-contractions were recorded within 5 s. In some experiments, myocytes were incubated with the calmodulin-dependent protein kinase II (CaMKII) inhibitor KN-93 (1 µmol/L, Sigma) or its analog KN92 (1 µmol/L, Sigma) as a control [16 (link),17 (link)].
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7

Phosphorylation-specific Beclin 1 Antibody Development

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Antibodies specific for Beclin 1 phosphorylated on Ser90 were generated by Abgent (San Diego, CA, USA, 1:500). Other primary antibodies used for western blotting were anti-Beclin 1 (Cell Signaling Technology, #3738, 1:1000), anti-GAPDH (KangChen, Shanghai, China, 1:10,000), anti-p-CaMKII (Cell Signaling Technology, #3361, 1:1000), anti-CaMKII (Santa Cruz, sc-1541, 1:500), anti-Bcl-2 (Santa Cruz, SC-7382, 1:500), anti-LC3 (Novus, Littleton, CO, USA, NB100-2220, 1:3000), anti-Id-1 (Santa Cruz, sc-488, 1:1000), anti-Id-2 (Cell Signaling Technology, #3431, 1:500), anti-SQSTM1 (Santa Cruz, sc-28359, 1:1000), anti-His-Tag (Cell Signaling Technology, #2366, 1:1000), anti-Myc-Tag (Cell Signaling Technology, #2276, 1:1000), anti-Flag (Sigma-Aldrich, F1804, 1:2000), anti-ubiquitin (Santa Cruz, sc-58449, 1:1000), anti-K63-linkage-specific polyubiquitin (Cell Signaling Technology, #5621, 1:1000), anti-TRAF-6 (Cell Signaling Technology, #8028, 1:1000), anti-GAP43 (Cell Signaling Technology, #8945 s, 1:1000), anti-NF68 (Cell Signaling Technology, #2837 s, 1:1000), anti-nestin (Santa Cruz, SC-23927, 1:1000), anti-vimentin (BD, 550513, 1:1000), and anti-E-cadherin (BD, 51-9001922, 1:1000). KN-93, MG132, and bafilomycin A1 were purchased from Sigma-Aldrich. Ionomycin was purchased from Cell Signaling Technology. EB1089 was purchased from Santa Cruz.
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8

Subcutaneous and Intrathecal Drug Injections

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MK801 and KN93 were obtained from Sigma-Aldrich (St. Louis, MO). MK801 was dissolved in saline, which served as its vehicle, and was injected subcutaneously in the scruff of the neck 20 min before formalin. KN93 was first dissolved in DMSO and then diluted with saline. The final concentration of DMSO was 25% (v/v), and this served as the vehicle for intrathecal injections. Mice were lightly anesthetized with isoflurane before intrathecal injection of vehicle or KN93 in a volume of 5 μL as previously described (Hylden and Wilcox, 1980 (link)).
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9

Oxidative Stress Modulation in Myotubes

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C2C12 mouse myogenic cells were grown in Dulbecco Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum and antibiotics (all cell culture reagents were from ThermoFisher Scientific). To induce myogenic differentiation, cells were washed with serum-free DMEM and transferred to differentiation medium (DMEM supplemented with 2% horse serum). After 6 days of differentiation, myotubes were incubated overnight in the presence of 0.5 mM H2O2, with or without CaMKII inhibitor KN93 (20 μM, Sigma). All experiments were done in triplicates.
For western blot analysis cells were collected in PBS using cell scraper. Cell pellets were resuspended in reducing sample buffer (80mM Tris-HCl, pH6.8, 2% sodium dodecyl sulfate, 10% glycerol and 0.1 M dithiothreitol) supplemented with Halt protease and phosphatase inhibitor cocktail (ThermoFisher Scientific).
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10

Protein Oxidation and Calcium Signaling Assays

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The OxyBlot Protein Oxidation Detection Kit and KN93 were purchased from Sigma (S7150). The phospho-CaMK antibody was purchased from Cell Signaling (12716); oxy-CaMK and total CaMKII antibodies were purchased from Genetex (GTX36254 and GTX111401). Kv channel antibodies were purchased from Alomone (APC-004, APC-012, APC-023). The MCU antibody was purchased from Cell Signaling (14997). RyR2 antibody was purchased from Thermofisher (MA3-916) and these blots were performed as previously described45 (link). To make protein lysates for western blots, cardiac samples were lysed in RIPA (Thermo Scientific RIPA Lysis and Extraction Buffer) with protease and phosphatase inhibitors (Halt Protease Inhibitor Cocktails, Halt Phosphatase Inhibitor Cocktail) using a bead beater. After the addition of Laemmli sample buffer with beta-mercaptoethanol, lysates were boiled for 5 min. Chemiluminescence (West Femto Maximum Sensitivity Substrate, ThermoFisher) was recorded with a digital gel imager and quantified with ImageJ software version 1.46r (https://imagej.nih.gov/ij/download.html).
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