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14 protocols using sodium glycerophosphate

1

Osteogenic Differentiation of hMDSCs

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Lenti-BMP2GFP-transduced hMDSCs and non-transduced hMDSCs were expanded in proliferation medium containing DMEM high glucose supplemented with 20% fetal bovine serum (FBS), 1% chicken embryo extract, and 1% penicillin/streptomycin. Pellet cultures were performed using a protocol previously described [13 (link),15 (link),17 (link)]. Briefly, 2.5 × 105 cells were aliquoted into 15 mL conical tubes and centrifuged at 2000 rpm for 5 min, after which the supernatant was removed. The cells were then resuspended with osteogenic medium containing DMEM high glucose supplemented with 10% FBS, 10−2 M sodium glycerophosphate, 50 μg/mL ascorbic acid, and 10−7 M dexamethasone (all from Sigma-Aldrich, St. Louis, MO, USA). The cells were mixed and centrifuged at 500× g for 5 min. The pellet was then cultured in osteogenic medium for 28 days and the osteogenic medium was changed every 2–3 days. After 28 days, pellets were fixed in neutral buffered formalin (NBF) for 1 h and scanned with microCT to detect mineralization using 70 kVP and 114 µA with 25 µm resolution (voxel size) using Viva CT 40 (Scanco Medical AG, Fabrikweg 2, Brüttisellen, Switzerland). After the micro-CT scan, the pellets were embedded in NEG frozen medium and flash frozen in liquid nitrogen. Next, 8 µm sections were cut and Von Kossa staining was performed using the IHC world protocol (Woodstock, MD, USA).
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2

Evaluating Venetoclax Effects on Fetal Metatarsal Growth

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Sprague–Dawley pregnant rats were purchased from Janvier labs at E13 and were housed in the animal facility for a 7-day adaptation period before euthanasia via carbon dioxide (CO2) to obtain the fetuses and collect the hind paws. The three middle metatarsals were microdissected from the hind paws and cultured in 24-well plates as previously described25 (link). The culture medium used was DMEM/F12 (Gibco) supplemented with 50 μg/ml ascorbic acid (Sigma-Aldrich), 1 mM sodium glycerophosphate (Sigma-Aldrich), 0.2% bovine serum albumin (BSA; Sigma-Aldrich) and 20 μg/ml gentamicin, including venetoclax (1 nM-10 μΜ) or DMSO for the control group. Culture medium changes together with an image capture of the bones (Hamamatsu C4742–95 digital camera mounted on a Nikon SMZ-U microscope) were performed on days 0, 2, 5, 7, 9 and 12 (termination of culture) and the bone length was measured with the Infinity Analyze software (Lumenera Corporation). Bone growth was expressed as % length increase from day 0 (start of the culture). Three independent experiments were performed, and each metatarsal was considered an independent observation. After termination of the experiment, the metatarsals from each group were washed in PBS, fixed in 4% paraformaldehyde (PFA) for 24 h, and embedded in paraffin for further analyses.
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3

Osteogenic and Adipogenic Differentiation of SHED

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For osteogenesis, SHED was seeded at a density of 1 × 104 cells/well on 12-well culture plates with 10% FBS in MEMα. At 70% confluence, the cells were cultured in osteogenic induction media consisting of MEMα, 10% FBS, 0.1 μM dexamethasone (Sigma-Aldrich, USA), 10 μM sodium-glycerophosphate (Sigma-Aldrich), and 100 μM ascorbic acid (Sigma-Aldrich) for 21 days. The cells in control were maintained in a basal medium. The media was changed twice a week. After induction, cells were stained with a 40 μM Alizarin Red S (Sigma-Aldrich, pH 4.2) in 4% paraformaldehyde solution for 30 minutes (Sigma-Aldrich). Images were captured using a phase-contrast microscope (Olympus).
For adipogenesis, SHED was seeded at a density of 1 × 104 cells per well onto 12-well culture plates in MEMα with 10% FBS. After 70% confluence, the cells were cultured in an adipogenic induction medium that included MEMα, 10% FBS, 10 μM of insulin, 200 μM of indomethacin, 500 μM of isobutyl-methylxanthine, and 1 μM dexamethasone (All from Sigma-Aldrich). The media was changed twice a week for 3 weeks. The cells in control were maintained in MEMα supplemented with 10% FBS. Oil red O staining (Sigma-Aldrich) was performed by fixing cells in 4% paraformaldehyde. After staining with 0.0125% Oil red O, the plates were observed under an inverted phase-contrast microscope (Olympus).
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4

Phosphomonoester and Phosphodiester Substrates

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All reactants, including p-nitrophenylphosphate (pNPP), bis p-nitrophenylphosphate (bis-pNPP), Thymidine 5′-monophosphate p-nitrophenylester sodium salt (TpNPP), calcium glycerophosphate (CaGP) and sodium glycerophosphate (NaGP) were purchased from Sigma-Aldrich. pNPP and glycerophosphate (GP) are phosphomonoesters while bis-pNPP and TpNPP are phosphodiesters.
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5

MSC-Spheroid Formation via 3D Rotation Culture

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The MSC-spheroid suspension was prepared using a 3D rotational culture system, as described previously [13 (link)–17 (link), 21 (link)]. In brief, the MSCs were detached from the tissue culture plate using 0.25 % trypsin/1 mM EDTA (Gibco Invitrogen, Grand Island, NY, USA) and resuspended at 1.0 × 107 cells in 5-mL osteogenic medium for rotation culture. The osteogenic medium [22 (link)] comprised DMEM supplemented with 10 % FBS, 100 nM dexamethasone (Sigma, St. Louis, MO), 0.05 mM l-ascorbic acid-2-phosphate (Sigma), 10 mM sodium glycerophosphate (Sigma), 100 U/mL penicillin, 100 μg/mL streptomycin, and 0.25 μg/mL amphotericin B. The cell suspension (MSCs in osteogenic medium) was placed in plates with an ultra-low attachment-coated polystyrene surface (Costar, 6-well cluster plates; Corning Costar Corp, Corning, NY). The dishes were placed on a shaker (Taitec, Saitama, Japan), rotated at a constant speed of 70 rpm, and incubated in a humidified 37 °C/5 % CO2 incubator for 1 day. MSC-spheroids were formed within a day of the rotation culture. The spheroids were detached from the culture dishes by pipetting and examined by phase-contrast microscopy using an Olympus AX80 microscope (Olympus, Tokyo, Japan).
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6

Adenylate Cyclase Enzyme Assay

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Streptozotocin, hCG, thyroid stimulating hormone (TSH) from bovine pituitary, thyrotropin-releasing hormone (TRH), forskolin, 5′-guanylylimidodiphosphate (GppNHp), creatine phosphate, creatine phosphokinase from the rabbit muscle, sodium glycerophosphate, sodium deoxycholate, phenylmethylsulfonyl fluoride, ortho-phenanthroline, pepstatin and other reagents were obtained from “Sigma-Aldrich” (St. Louis, MO, USA). Radiolabeled substrate for AC, [α-32P]-ATP was obtained from “Izotope” (Moscow, Russia).
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7

Evaluating Metatarsal Bone Growth

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E13 Sprague-Dawley pregnant rats were purchased from Janvier Labs and allowed to acclimatize in the animal facility for 7 days. Water and standard food pellets were provided ad libitum. Thereafter, the rat dams were humanely euthanized via CO2 on day 20 of gestation and the E20 embryos were obtained. After decapitation, the hind paws were collected and the 3 middle metatarsal bones were microdissected under an inverted microscope, as previously described [26 (link)]. Next, the metatarsals were transferred to 24-well plates and randomly distributed to the following groups: (i) control; (ii) venetoclax 3.75 μM; (iii) HNG 10, 20, or 40 μM; and (iv) the combination of venetoclax and HNG. The culture medium used was Dulbecco’s modified Eagle’s medium (DMEM)/F12 (Gibco) supplemented with 50 μg/mL ascorbic acid (Sigma-Aldrich), 1 mM sodium glycerophosphate (Sigma-Aldrich), 0.2% bovine serum albumin (Sigma-Aldrich), and 20 μg/mL gentamicin, and the compounds of interest (venetoclax, HNG) were diluted in the medium from stock solutions. Medium changes together with image capture (Hamamatsu C4742-95 digital camera mounted on a Nikon SMZ-U microscope) and length measurements (Infinity Analyze software, Lumenera Corporation) were performed on days 0, 2, 5, 7, 9, and 12 (termination). Three independent experiments were performed, and each metatarsal bone was considered an experimental unit.
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8

Isolation and Culture of Dental Papilla Mesenchymal Cells

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We isolated primary dental papilla mesenchymal cells (mDPCs) from embryonic day 18.5 (E18.5) first molar tooth germ. A dissection needle was employed to remove the dental epithelium after digestion using 0.75 mg/ml of dispase (Becton, Dickinson and Co., Franklin Lakes, NJ, USA). The tooth germ was isolated from the mandible using forceps, dispersed, and digested with 0.25% trypsin-EDTA (Life Technologies, Carlsbad, CA, USA) at 37°C for 15 min. Cells were cultured in Dulbecco’s modified Eagle medium (DMEM; Hyclone, Pittsburgh, PA, USA). To induce mineralization, mDPCs between passage 2 and 4 were cultured in an induction medium supplemented with 50 μg/ml of ascorbic acid (Sigma, St. Louis, MO, USA), 10 mmol/L sodium-glycerophosphate, and 10 nmol/L dexamethasone (Sigma). All the cells used in this study were maintained in 5% CO2 at 37°C, and the medium was replenished every 2 days.
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9

Osteogenic Differentiation Protocol

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An osteogenic medium containing 10% FBS, 1% penicillin/streptomycin, 10 nM dexamethasone (Sigma, St. Louis, MO, USA), 10 mM sodium-glycerophosphate (Sigma, St. Louis, MO, USA), and 50 g/mL ascorbic acid (Sigma, St. Louis, MO, USA) was used to induce osteogenic differentiation. After treatment, osteogenic induction medium was used in the following experiment for six days (ALP staining, real-time PCR and western blot) and 14 days (Alizarin red staining).
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10

EDTA-Based Stem Cell Differentiation

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Ethylene diamine tetraacetic acid (EDTA), ascorbic acid, sodium glycerophosphate, dexamethasone, cetylpyridinium bromide, alizarin red S and Triton-X100 were obtained from Sigma-Aldrich (USA). Foetal bovine serum (FBS), αMEM medium, non-essential amino acid (NEAA), β-mercaptoethanol, L-glutamax and penicillin/streptavidin were purchased from Gibco (USA). Cell culture plates and Matrigel were bought from Corning (USA). Methanol, absolute ethanol, chloroform, hydrochloric acid and isopropanol were obtained from BCIGC (China). Bovine serum albumin (BSA), phosphate buffer, N-hydroxysulfosuccinimide sodium salt (NHSS) and 1-ethyl-3-(3-dimethylamino propyl) carbodiimide (EDC) were purchased from Aladdin (China). BCIP/NBT alkaline phosphatase colouring kit and ALP quantitative detection kit was acquired from CWBIO (China). SYBR Green I and TRIzol were bought from Takara (Japan). Paraformaldehyde was obtained from Solarbio (China). Quartz crystal microbalance chips were obtained from HRbio (China). Cell counting kit-8 (CCK8) was purchased from Dojindo (Japan). RevertAid™ First Stand cDNA Synthesis Kit was gained from Thermo (USA). Cell cycle assay reagent was obtained from KoradBio (China). E8 medium was acquired from Cellapy (China). DAPI stain was purchased from Roche (Switzerland). Carboxyl functionalized QCM chips were provided by Dongwei BiologicalTechnology Co., LTD (China).
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