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Pclamp 10 software suite

Manufactured by Molecular Devices
Sourced in United States

PCLAMP 10 is a software suite for data acquisition and analysis. It provides tools for recording and analyzing electrophysiological data from various types of experiments.

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10 protocols using pclamp 10 software suite

1

Optical Surface Potential Measurements

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Surface potential measurements were performed with a patch-clamp setup (Axopatch 200B, Axon Instruments) coupled to an inverted microscope (Nikon Eclipse Ti). A LED system (Lumencor Spectra X), fiber-coupled to the fluorescence port of the microscope, provided the light for the optical excitation of the devices. The samples were illuminated with 540 nm light pulses at photoexcitation density of 222 mW/mm2. The size of the light spot is 0.23 mm2. Recordings are carried out in voltage clamp configuration by micro-manipulating freshly pulled glass pipettes (3÷6 MΩ) in the close proximity (~ 2 μm) of the polymer-electrolyte interface. Both the pipette and the bath are filled with electrolytic Krebs-Ringers-Henseleit solution (KRH) to avoid junction potentials artifacts. The measured current is set to zero under dark conditions; surface potential is then calculated by multiplying the current trace measured upon illumination by the pipette resistance. All measurements were performed at room temperature. Acquisition was performed with pClamp 10 software suite (Axon Instruments) and all data were elaborated with Origin 8.0.
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2

Optical Surface Potential Measurements

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Surface potential measurements were performed with a patch-clamp setup (Axopatch 200B, Axon Instruments) coupled to an inverted microscope (Nikon Eclipse Ti). A LED system (Lumencor Spectra X), fiber-coupled to the fluorescence port of the microscope, provided the light for the optical excitation of the devices. The samples were illuminated with 540 nm light pulses at photoexcitation density of 222 mW/mm2. The size of the light spot is 0.23 mm2. Recordings are carried out in voltage clamp configuration by micro-manipulating freshly pulled glass pipettes (3÷6 MΩ) in the close proximity (~ 2 μm) of the polymer-electrolyte interface. Both the pipette and the bath are filled with electrolytic Krebs-Ringers-Henseleit solution (KRH) to avoid junction potentials artifacts. The measured current is set to zero under dark conditions; surface potential is then calculated by multiplying the current trace measured upon illumination by the pipette resistance. All measurements were performed at room temperature. Acquisition was performed with pClamp 10 software suite (Axon Instruments) and all data were elaborated with Origin 8.0.
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3

Whole-cell Patch-clamp Recordings of HEK-293 Cells

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Intracellular recordings were performed using a patch-clamp setup (Axopatch 200B, Axon Instruments) coupled to an inverted microscope (Nikon Eclipse Ti-U). The light source for excitation of the polymer was provided by a LED system (Lumencor Spectra X) fibre-coupled to the fluorescence port of the microscope; the illuminated spot on the sample had an area of 0.23 mm 2 . HEK-293 cells were measured at 1-2 DIV in wholecell configuration with freshly pulled glass pipettes (3-6 MO), filled with the following intracellular solution [mM]: 12 KCl, 125 K-gluconate, 1 MgCl 2 , 0.1 CaCl 2 , 10 EGTA, 10 HEPES, 10 ATP-Na 2 . The extracellular solution contained [mM]: 135 NaCl, 5.4 KCl, 5 HEPES, 10 glucose, 1.8 CaCl 2 , 1 MgCl 2 . Only single HEK-293 cells were selected for recordings. All measurements were performed at room temperature. Acquisition was performed using the pClamp 10 software suite (Axon Instruments) and all data were elaborated with Origin 8.0.
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4

Voltage-clamp and Current-clamp Analysis of Mature Brown Adipocytes

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Mature brown adipocytes were isolated and attached to coverslips as described above. Whole cell voltage-clamp recordings were performed at room temperature in an external solution containing 145 mM NaCl, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM glucose, and 10 mM HEPES (pH 7.4). Recording electrodes (2–5 MΩ) were filled with an internal solution containing 140 mM KCl, 2 mM MgCl2, 10 mM HEPES, 1 mM EGTA, 4 mM Mg2+-ATP, 0.3 mM Na+-GTP, and 0.1 mM Na2hosCre (pH 7.2). For voltage-clamp recordings, currents were elicited by 2 s polarizing steps from a holding potential of −60 mV to test potentials ranging from −70 mV to 50 mV in 20 mV increments to study the current-voltage relationship, using an Axopatch 200B amplifier (Axon Instruments). For current-clamp recordings, membrane potential was determined by averaging 50s before NE treatment, 600s during NE treatment, and 120s after NE wash off, respectively. To study the acid-sensitivity, brown adipocytes were differentiated in vitro and attached to coverslips as described above. Currents in response to the 30 mV voltage step were compared at pH 6.4, 7.4, and 8.4 using a perfusion needle. Data were low-pass filtered at 2 kHz, digitized at 20 kHz, and analyzed using the pCLAMP 10 software suite (Molecular Devices).
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5

High-Resolution 3D Tissue Charge Mapping

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Borosilicate glass pipettes (1 to 0.5 mm2) were pulled with an inner diameter of 500 nm using a Sutter Instrument model P-97. They were filled with a 3 M KCl solution and integrated with Axon MultiClamp and Axon Digidata 1550 modules for data acquisition. Pipettes were implanted using a Sensapex uMp zero drift manipulator. Current values were recorded using the pCLAMP 10 software suite (Molecular Devices LLC, San Jose, CA). To be able to get an accurate 2D map of charge density, for each stimulation pulse, the micropipette is repositioned axially (by varying the depth of penetration with 20-μm steps down to 500 μm below the pial surface), and for each axial position, a selection of electrodes at various lateral positions with a pitch of 40 μm are activated sequentially. To obtain current values, voltage values are acquired in current-clamp mode with I = 0. Measured tissue resistance (at DC) at the point of current value measurement with respect to the reference (that is grounded) is used to estimate the current value. To increase the accuracy of this estimation, current values are averaged for each point from five different experiments with variations in the range of 20%.
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6

Sinusoidal-Frequency Curve Measurement

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In order to evaluate alterations in suprathreshold oscillation frequencies under different conditions, we measured the sinusoidal–frequency curves as reported previously [59 ]. In short, 10-s stimulating protocols of sinusoidal current (chirp stimulation), in which there was a linear increase in the frequency from 0.1 to 100 Hz, were delivered at 30, 60, 125 and 250 pA, using the pClamp 10 software suite (Molecular Devices, Sunnyvale, CA, USA) and injected into the neuronal soma through the recording electrode.
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7

Frequency-Dependent Suprathreshold Oscillations

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In order to evaluate alterations in suprathreshold oscillation frequencies under different conditions, 10-s stimulating protocols of sinusoidal current (chirp stimulation), in which there was a linear increase in the frequency from 0.1 to 100 Hz, were designed at 30, 60, 125, and 250 pA, using the pClamp 10 software suite (Molecular devices, Sunnyvale, CA).
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8

Whole-Cell Patch-Clamp Recordings in Neurons

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Whole cell patch-clamp recordings were performed at room temperature in an external solution containing 145 mM NaCl, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM glucose, and 10 mM HEPES (pH 7.4). Recording electrodes (2–5 MΩ) were filled with an internal solution containing 135 mM K-Gluconate, 10 mM KCl, 1 mM MgCl2, 5 mM EGTA, and 10 mM HEPES (pH 7.2). For voltage-clamp recordings, currents were elicited by 3 s polarizing steps from a holding potential of −80 mV to test potentials ranging from −80 mV to 50 mV in 10 mV increments to study the current-voltage relationship, using an Axopatch 200B amplifier (Axon Instruments). For current-clamp recordings, membrane potential was hold at −65 mV and a depolarizing current ramp (0 to 200 pA in one second) was applied to induce action potentials, or hold at around −50 mV to monitor spontaneous firing. Only neurons displaying mature morphology and big sodium currents (> 1nA) were chosen. Data were low-pass filtered at 2 kHz, digitized at 20 kHz, and analyzed using the pCLAMP 10 software suite (Molecular Devices).
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9

Whole-Cell Patch-Clamp Recordings in Neurons

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Whole cell patch-clamp recordings were performed at room temperature in an external solution containing 145 mM NaCl, 5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM glucose, and 10 mM HEPES (pH 7.4). Recording electrodes (2–5 MΩ) were filled with an internal solution containing 135 mM K-Gluconate, 10 mM KCl, 1 mM MgCl2, 5 mM EGTA, and 10 mM HEPES (pH 7.2). For voltage-clamp recordings, currents were elicited by 3 s polarizing steps from a holding potential of −80 mV to test potentials ranging from −80 mV to 50 mV in 10 mV increments to study the current-voltage relationship, using an Axopatch 200B amplifier (Axon Instruments). For current-clamp recordings, membrane potential was hold at −65 mV and a depolarizing current ramp (0 to 200 pA in one second) was applied to induce action potentials, or hold at around −50 mV to monitor spontaneous firing. Only neurons displaying mature morphology and big sodium currents (> 1nA) were chosen. Data were low-pass filtered at 2 kHz, digitized at 20 kHz, and analyzed using the pCLAMP 10 software suite (Molecular Devices).
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10

Compound Muscle Action Potential Analysis

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To perform compound muscle action potential (CMAP) recordings, mice were anesthetized using a KAX cocktail (ketamine 60–100 mg/kg, xylazine 8–12 mg/kg, acepromazine 0.5–2 mg/kg), and their hind legs were shaved. The sciatic nerve was stimulated with brief electrical currents applied using bipolar needle electrodes (0.3 Hz, 0.5-ms pulse duration, starting at 0 mA and incrementing by 5 mA). The response from the gastrocnemius (GC) muscle was recorded using needle electrodes placed in the center of the muscle and in the tendon [39 (link)]. The M-wave was measured at each amplitude until the maximal response was elicited. Maximum evoked amplitudes were analyzed using the pCLAMP 10 software suite (Molecular Devices).
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