The largest database of trusted experimental protocols

2 protocols using ab124024

1

Proximity Ligation of OTUD3 and ZFP36 in Nicotine-Treated Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proximity ligation was performed using the Rabbit PLUS and Mouse MINUS Duolink In Situ PLA kits (Sigma-Aldrich) according to the manufacturer’s protocol. Briefly, KYSE180 cells (5 × 104) were plated on coverslips and treated with nicotine or vehicle for 24 h. The cells were then washed twice with phosphate-buffered saline (PBS) and fixed with 3.7% formaldehyde in PBS for 15 min at room temperature (RT). Subsequently, cells were washed with TBS (25 mM Tris, 100 mM NaCl, pH 7.4), incubated for 10 min in 50 mM NH4Cl, TBS, washed with TBS, permeabilized for 15 min in 0.1% Triton X-100 in TBS, washed with TBST (0.05% Tween 20 in TBS), and then blocked for 2 h with 0.5% milk powder in TBST in a humidified chamber at RT and incubated overnight at 4 °C with anti-OTUD3 (Sigma-Aldrich, HPA028544) and anti-ZFP36 (Abcam, ab124024) antibodies. After washing with TBST, proximity ligation was performed using the PLA kits (Sigma-Aldrich). Cells were further counterstained with 4,6-diamidino-2-phenylindole (Sigma-Aldrich) to visualize the nuclei. The images were obtained by using laser scanning confocal microscopy (LSM880, Carl Zeiss MicroImaging, Oberkochen, Germany).
+ Open protocol
+ Expand
2

Protein Expression Analysis in Spinal Cord Tissue

Check if the same lab product or an alternative is used in the 5 most similar protocols
Frozen spinal cord tissue sections stored in liquid nitrogen were taken out, and proteins were extracted with the addition of 1 ml RIPA lysis buffer (#89901, Thermo Scientific, USA) containing 2% protease inhibitor and 1% PMSF followed by completely homogenisation using an ultrasound homogeniser. Tissue homogenisations were then centrifuged at 12,000 rpm for 10 min, and the supernatants were collected and stored in -80°C for later use. Protein concentrations were quantified using BCA assay. Concentrated protein samples were then loaded into SDS-PAGE gels for electrophoresis and transferred onto 0.45 μm PVDF membranes. Membranes were then incubated with diluted primary antibodies against MK2 (ab131531, Abcam, UK), p-MK2 (ab131504, Abcam, UK), TTP (ab124024, Abcam, UK), NLRP3 (ab263899, Abcam, UK), pro-caspase-1 (ab179515, Abcam, UK), pro-IL-1β (ab205924, Abcam, UK), iNOS (ab15323, Abcam, UK), arg-1 (ab272887, Abcam, UK), and GAPDH (ab8245, Abcam, UK) as loading internal control at 4°C for 12 h. On the next day, membranes were incubated with HRP-conjugated secondary antibody for 1 h at room temperature after rinse with TBST buffer solution for 3 changes. ECL chemo-reagents were then applied onto the membranes, and membranes were captured using an imaging system. Grey values of protein bands were detected and analysed using the ImageJ software.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!