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Brain derived neurotrophic factor bdnf

Manufactured by R&D Systems

Brain-derived neurotrophic factor (BDNF) is a protein that plays a crucial role in the growth, differentiation, and survival of neurons in the central and peripheral nervous systems. BDNF is involved in the regulation of synaptic transmission and plasticity, and is important for cognitive functions such as learning and memory.

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6 protocols using brain derived neurotrophic factor bdnf

1

Directed Differentiation of HD-iPSCs to Striatal Neurons

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The human HD-iPSC line (60 CAG HD line) from the Coriell Institute for Medical Research was cultured on L7 (Lonza) matrix in STEMPRO medium (Invitrogen) supplemented with 10 ng/mL recombinant human fibroblast growth factor 2 (FGF2). Cells were fed daily and manually passaged every 5–7 days. Striatal neuron precursors were derived as previously described in Nicoleau et al.60 (link) and Arber et al.61 (link) Neuralized and patterned human iPSCs, enriched for ventral telencephalic progenitors, were collected after 21 DIV using Accutase for 10–20 min at 37°C and frozen in CryoStor CS10 (Invitrogen) freezing media. For terminal neuronal differentiation of striatal precursors, cells were plated on polyornithine laminin-coated dishes at 40,000 cells/cm2 in DMEM/F12 media supplemented with N2, B27, 20 ng/mL brain-derived neurotrophic factor (BDNF; R&D Systems), 0.5 mM N6,2′-O-dibutyryladenosine 3′,5′-cyclic monophosphate sodium salt (dbcAMP; Sigma-Aldrich), 0.5 mM valpromide (Lancaster Synthesis), and 25 ng/mL Activin A for 30–35 additional days.
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2

Cortical Differentiation Protocol for iPSCs

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For cortical differentiation from days 2 to 10, spheres were gradually adapted to NIM through a dilution series of KSR and NIM, with dual SMAD inhibition maintained until day 7. Medium was changed as follows: days 2–4: 100% KSR medium with the Wnt signaling inhibitor XAV939 (2 μM) (Stemgent); day 5: 75% KSR medium, 25% NIM; day 7: 50% KSR medium, 50% NIM; day 9: 25% KSR medium, 75% NIM. From days 11 to 21, cultures were maintained in 100% NIM (Maroof et al., 2013 (link)). From day 21 onward, cultures were maintained in NB medium with 10 ng/ml brain-derived neurotrophic factor (BDNF) and 10 ng/ml glial cell-derived neurotrophic factor (GDNF) (both from R&D).
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3

Efficient Motor Neuron Differentiation from ESCs/iPSCs

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ESCs/iPSCs were treated with CTK dissociation solution for 2 min and feeder cells were removed with PBS. Then ESCs/iPSCs were dissociated to single cells with Accumax, and they were transferred onto Matrigel-coated plates with MN medium containing a 1:1 mixture of Neurobasal medium (Thermo Fisher Scientific) and DMEM/F12 (Thermo Fisher Scientific), supplemented with 0.5% N2 (Thermo Fisher Scientific), 1% B27 (Thermo Fisher Scientific), 1 μM retinoic acid (Sigma-Aldrich), 1 μM smoothened agonist (Enzo Life Sciences), 10 ng/mL brain-derived neurotrophic factor (BDNF; R&D Systems), 10 ng/mL glial cell-derived neurotrophic factor (GDNF; R&D Systems), 10 ng/mL neurotrophin-3 (NT-3; R&D Systems), and 10 μM Y-27632 (Nacalai Tesque). At the same time, the ESCs/iPSCs were infected with SeV-L-N-I; SeV-L-N-I-EGFP; or combinations of SeV-L, SeV-N, and SeV-I (ID Pharma) on day 0. MOIs were 5 or 10. The transduction of SeV vectors to human ESCs/iPSCs was conducted just once. The number of cells per well was 5.0 × 104 in 96-well plates and 1.0 × 106 in 12-well plates. The medium was changed to MN medium without Y-27632 on day 1 and then changed every 3 days.
For phenotype assays, cells were treated with Accumax plus 10 μM Y-27632 and transferred onto poly-L-lysine- and Matrigel-coated glass dishes on day 7. For immunocytochemistry and qPCR analyses, cells were assessed on day 14.
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4

Culturing Rat Cortical Neurons

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The animal experiments and procedures were approved by the Institutional Animal Care Committee at Technion—Israel Institute of Technology and were in accord with the National Institutes of Health Guide for the Care and Use of Laboratory Animals.
We removed and diced cortical tissue from embryonic day 18 (E18) Sprague Dawley rats in cold PBS solution with 20 mM glucose, mechanically dissociated neural cells (by forcing a few times through a pipette), and filtered the suspension using a 70μm cell strainer (Biologix). 1.2-1.8 million cells were encapsulated in 30 μl Matrigel scaffold (Growth factor reduced, BD Biosciences). Culturing media was composed of Minimal Essential Media (MEM, Sigma) containing 17 mM glucose, 100μl/ml of NU Serum (BD Biosciences), 30mg/ml of L-Glutamine (Sigma), 1:500 B-27 supplement (Gibco), 50ng/ml of Nerve Growth Factor (NGF, Alomone labs), 10ng/ml of Brain-Derived Neurotrophic Factor (BDNF, R & D systems), 25 μg/ml of Insulin (Sigma), and 2μg/ml of Gentamicin. Half the volume of the culturing media was replaced twice a week. In a second group of cultures, 3μM of Arabinofuranosyl Cytidine (ARA-C, Sigma) to inhibit glial cell proliferation was added once at DIV 3.
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5

Mouse ESC Neuronal Differentiation Protocol

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Mouse ESC (R1) cultures were co-cultured with immortalized PA6 feeder cells. Differentiation of mouse ESCs was done following a 14-day in vitro protocol (Barberi et al., 2003 (link)). Mouse ESCs were maintained in proliferation medium (Knockout-DMEM, 15% Knockout Serum Replacement, 2 mM L-glutamine, 10,000 U/mL penicillin/streptomycin [all from Life Technologies], 1% non-essential amino acids [VWR], 0.1 mM β-mercaptoethanol [Sigma], and 1,000 U/mL leukemia inhibitory factor [LIF] [ESGRO; Chemicon/Millipore]). Mouse ESCs were plated (150 cells/cm2) on a confluent mitomycin C-treated PA6 feeder cell layer in 24-well plates in proliferation medium without LIF. At day 5, sonic hedgehog (SHH) (200 ng/mL) and fibroblast growth factor 8 (FGF8) (25–100 ng/mL) were added to the medium. After 8 days, N2 medium was used in the presence of SHH, FGF8, and basic FGF (10 ng/mL). From day 11 to 14, N2 medium containing ascorbic acid (AA) (200 μM) (Sigma), brain-derived neurotrophic factor (BDNF) (20 ng/mL) (R&D Systems), and glial cell line-derived neurotrophic factor (GDNF) (10 ng/mL) (R&D Systems) was used. Treatments with recombinant spondins or vehicle started at day 5 and lasted up until day 11, concentrations the same as primary cultures. Cells were then fixed with 4% PFA and processed for staining.
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6

Culturing Rat Cortical Neurons

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The animal experiments and procedures were approved by the Institutional Animal Care Committee at Technion—Israel Institute of Technology and were in accord with the National Institutes of Health Guide for the Care and Use of Laboratory Animals.
We removed and diced cortical tissue from embryonic day 18 (E18) Sprague Dawley rats in cold PBS solution with 20 mM glucose, mechanically dissociated neural cells (by forcing a few times through a pipette), and filtered the suspension using a 70μm cell strainer (Biologix). 1.2-1.8 million cells were encapsulated in 30 μl Matrigel scaffold (Growth factor reduced, BD Biosciences). Culturing media was composed of Minimal Essential Media (MEM, Sigma) containing 17 mM glucose, 100μl/ml of NU Serum (BD Biosciences), 30mg/ml of L-Glutamine (Sigma), 1:500 B-27 supplement (Gibco), 50ng/ml of Nerve Growth Factor (NGF, Alomone labs), 10ng/ml of Brain-Derived Neurotrophic Factor (BDNF, R & D systems), 25 μg/ml of Insulin (Sigma), and 2μg/ml of Gentamicin. Half the volume of the culturing media was replaced twice a week. In a second group of cultures, 3μM of Arabinofuranosyl Cytidine (ARA-C, Sigma) to inhibit glial cell proliferation was added once at DIV 3.
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