The largest database of trusted experimental protocols

Abi gene express 2.0 program

Manufactured by Thermo Fisher Scientific
Sourced in United States

The ABI gene express 2.0 program is a software tool designed for gene expression analysis. It provides a platform for the processing and analysis of gene expression data generated from various experimental techniques.

Automatically generated - may contain errors

2 protocols using abi gene express 2.0 program

1

Quantification of Gene Expression by RT-qPCR

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from the cells, or dorsal tissue using an Easy Blue kit (Intron Biotechnology, Inc., Seoul, Korea) according to the manufacturer’s protocol. Total RNA was quantified using an Epoch micro-volume spectrophotometer system (BioTek Instruments, Inc., Winooski, VT, USA). cDNA was obtained using isolated total RNA (2 μg), d (T)16 primer, and Avian Myeloblastosis Virus reverse transcriptase with genomic DNA remover. The relative gene expression was quantified using RT-qPCR analysis (Real Time PCR System 7500; Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA) with SYBR Premix Ex Taq. Fold changes of gene expression were calculated using the comparative quantification cycle (Cq) method. The Cq values of target genes were normalized to that of GAPDH using the ABI gene express 2.0 program (Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA).
+ Open protocol
+ Expand
2

RNA Isolation and RT-qPCR Analysis of Gene Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from the liver tissues, adipose tissues, or cells using an Easy Blue kit (Intron Biotechnology, Inc., Seoul, Korea) according to the manufacturer’s protocol. Total RNA was quantified using an Epoch micro-volume spectrophotometer system (BioTek Instruments, Inc., Winooski, VT, USA). cDNA was obtained using isolated total RNA (2 μg), d(T)16 primer, and Avian Myeloblastosis Virus reverse transcriptase with genomic DNA remover. Relative gene expressions were quantified using RT-qPCR analysis (Real Time PCR System 7500; Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA) with SYBR Premix Ex Taq. Fold changes in gene expression were calculated using the comparative quantification cycle method. The Cq values of target genes SREBP-1, PPARγ, C/EBPα, TNF-α, IL-6, IL-1β, MCP-1, leptin, adiponectin, FOXO1, SIRT1, AMPK, LKB1, and CaMKK were normalized to that of GAPDH using the ABI Gene Express 2.0 program (Applied Biosystems; Thermo Fisher Scientific, Inc., Waltham, MA, USA). The sequences of oligonucleotide primers are described in Table 1.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!