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5 protocols using cd11b bv785

1

Comprehensive Monocyte Phenotyping by Flow Cytometry

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Total blood counts, leucocyte, and monocyte counts were measured with a Sysmex XN-450 Hematology Analyzer (Sysmex Corporation, Kobe, Japan). Undiluted blood (50 µL) was incubated for 15 min in the dark at room temperature with the following antibodies: CD3-APC-750 (mouse, dilution: 1:25; Beckman Coulter, Woerden, The Netherlands), CD56-APC (mouse, 1:25; Beckman Coulter), CD16-FITC (mouse, 1:25; eBioscience Thermo Fisher Scientific, Breda, The Netherlands), CD14-PC7 (mouse, 1:25; eBioscience Thermo Fisher Scientific), CCR2-BV421 (mouse, 1:50 and 1:25; BD Biosciences), CD36-APC-700 (mouse, 1:10; Beckman Coulter), CD41-PC5.5 (mouse, 1:50; Biolegend, San Diego, CA, USA), CD11b-BV785 (mouse, 1:50 and 1:25; Biolegend). Followed by the addition of 1 mL 10× diluted lysis buffer (BD Pharm Lyse; BD Biosciences), samples were mixed and incubated for 10 min in the dark at room temperature. Samples were then measured on a Beckman Coulter FC500 flow cytometer, each sample was measured both stained and unstained. Flow cytometry data were analysed using Kaluza software (Beckman Coulter); for gating strategy, see Supplementary material online, Figure S1. Besides determining the different monocyte subsets (classical, intermediate, or non-classical). Atherogenic markers CCR2, CD36, CD41, and CD11b were determined per monocyte subset.
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2

Multiparametric Flow Cytometry Analysis

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Antibodies were obtained from BioLegend and used at a dilution of 1:200: CD45 BV605 (30‐F11), CD11b BV785 (M1/70), F4/80 PE‐Cy7 (BM8), SiglecF BV421 (S17007L), Ly6C APC‐Fire 750 (HK1·4), CD11c BV650 (N418), MHCII AF700 (M5/114·15·2), CD64 AF647 (X54‐5/7·1), MerTK FITC (2B10C42) and CD206 PerCP‐Cy5·5 (C068C2) for 30 min at 4°C. Ly6G BUV395 (1A8) and CD103 BUV805 (M290) were obtained from BD Bioscience. Dead cells were excluded using Fixable Viability Dye eFluor 506 (Thermo Fisher). Flow cytometry was performed using a Fortessa (BDBiosciences) and analysed using FlowJo V10.
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3

Immunophenotyping of Immune Cells

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For staining with extracellular markers, cells were first treated with Fc block (Biolegend, 101320) in PBS (Fisher, 10010023) with 3% FBS for 30 min. Then, the following antibodies were added: CD3-APC Cy7 (Biolegend, 100221), CD19-APC Cy7 (Biolegend, 115530), CD11c-APC (Biolegend, 117309), CD11b-BV785 (Biolegend, 101243), and live-dead dye (Fisher, L10119), and cells were further incubated on ice in the dark for another 30 min. Cells were then washed with PBS and fixed with 4% paraformaldehyde (PFA) (Fisher, 28908) for 15 min at room temperature. Samples were acquired on a LSR II cytometer (BD) and data were analyzed using FlowJo software.
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Comprehensive Immune Profiling of Tumor Microenvironment

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MC38, YUMM2.1, and YUMM1.1 tumors and spleens were harvested from mice at pre-defined time points. Tumors were digested with collagenase D (Roche), and stained with antibodies to CD3 BV605, Ly6C FITC, PD-L1/CD274 PE, CD8a BV421, CD45RA/B220, CD11b BV785, CD11c PECy7, CD103 PerCP Cyanine 5.5, MHC Class II (I-A/I-E) FITC (Biolegend, San Diego, CA), Ly6G (Gr-1) PerCP Cyanine 5.5, F4/80 Pacific blue/eFluor450, CD25 APC, CD4 FITC (eBioscience, San Diego, CA). Intracellular staining of Foxp3 PE (eBioscience) was done according to manufacturer's recommendations. Cells were analyzed with a LSR-II or FACSCalibur flow cytometer (BD Biosciences, San Jose, CA), followed by Flow-Jo software (Tree-Star, Ashland, OR) analysis (28 (link)).
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5

Multicolor Flow Cytometry: Neutrophil Characterization

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Whole blood and bone marrow samples were lysed using 0.84% NH4Cl and stained with the following antibodies: CD14—PerCP Cy5.5 (clone: M5E2, BD), CD80—FITC (Santa Cruz Biotechnology, Dallas, TX, United States), Siglec8—PE (clone: 7C9, BioLegend, San Diego, CA, United States), CD16—APC H7 (clone: 3G8, BD), CD66b—Alexa flour 700 (clone: G10F5, BioLegend), CD184—APC (clone: 12G5, eBioscience, San Diego, CA, United States), CD11b—BV785 (clone: ICRF44, BioLegend), CD62L—BV650 (clone: DREG-56, BioLegend), CD193—V510 (clone: 5 E8, BD), CD45—V450 (clone: 2D1, BD), HLA-DR—PE Cy7 (clone: L243, BD), and CD69—PE/DAZZLE (clone: FN50, BioLegend). The samples were then analyzed on FACS Aria Fusion (BD), for gating strategy see supplement figure 1. Single cells were gated, whereupon neutrophils were characterized as CD45+CD14CD193 cells and then further divided into mature, immature, and CD11b immature neutrophils based on their expression of CD11b and CD62L. When investigating the level of activation before and after isolation, as well as when analyzing the purity, the same antibody panel was used but the analysis was performed on Cytoflex (Beckman Coulter, Brea, CA, United States). All data was then analyzed using the Kaluza software (BD).
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