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4 protocols using flagellin from salmonella typhimurium

1

Immune Response of HIEC Cells

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SOCS3Ev and SOCS3Low HIEC cells were seeded at a concentration of 1 × 105/ml, allowed to adhere for 24 h, then deprived of serum (and antibiotic) overnight prior to treatments. HIECs were treated with flagellin from Salmonella typhimurium (0.1 μg/ml, InvivoGen, San Diego, CA), interferon gamma (IFNɣ 10 ng/ml, Peprotech, Rocky Hill, NJ) or Trichuris muris excretory/secretory protein (ES, 0.1 mg/ml) for 2 h for mRNA and 4 h for protein analysis.
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2

Cytokine Signaling Pathway Modulation

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Ham’s F12 medium was obtained from GE Healthcare Europe (Freiburg, Germany). RPMI-1640, GlutaMax and FCS were purchased from Life Technologies (Darmstadt, Germany). PBS was acquired from Biochrom (Berlin, Germany). Pargyline (Parg), phorbol 12-myristate 13-acetate (PMA) and trichostatin A (TSA) were supplied by Sigma-Aldrich Chemie (Munich, Germany). IL-1β, IL-1ra, TNF-α and anti-TNF-α were obtained from R&D Systems (Wiesbaden, Germany). Flagellin from Salmonella typhimurium was purchased from InvivoGen (San Diego, USA) and actinomycin D was supplied from Biovision (Milpitas, USA). All other applied chemicals were of analytical grade and acquired from commercial sources.
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3

Evaluating TLR Signaling in IgT-Depleted Trout

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To investigate whether TLR signaling remains intact in IgT-depleted trout, individual control and IgT-depleted fish (at 3 weeks after depletion treatment) were injected intraperitoneally with PBS or lipoteichoic acid (LTA) from Bacillus subtilis (Sigma, 10 μg/g fish), resiquimod (R848, Sigma, 10 μg/g fish), or flagellin from Salmonella typhimurium (InvivoGen, 1 μg/g fish) (n = 7 fish per group). Six hours post injection, fish were sacrificed and the gills were collected for total RNA extraction. As readouts of TLR activation we measured transcript levels of selected fish cytokines including il1β, il6, il8 and tnfα ½ using real-time PCR (as described in the Supplementary Methods).
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4

Isolation of Murine Epidermal Keratinocytes

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Isolation of primary epidermal keratinocytes was performed as described earlier (23 (link)). Briefly, disinfected tail skins of adult mice were digested overnight at 4˚C with trypsin (0.25%; w/o CaCl2, Gibco, Thermo Fisher Scientific, USA). Detached epidermal cells were seeded overnight at 32°C, 5% CO2 in minimum essential medium with Earle`s Balanced Salt Solution medium (Lonza, Switzerland) containing 0.2 mM CaCl2 (Merck, Germany). Subsequently 1x106 isolated cells were cultured on fibronectin (Roche, Switzerland)/rat tail collagen I (Becton Dickinson, Corning, USA)-coated six well-culture plates in Keratinocyte Growth Medium 2 with supplement mix (PromoCell, Germany) to the confluence of 70–80%. Culture and stimulation conditions in Keratinocyte Growth Medium 2 (PromoCell, Germany) are indicated in Supplementary Figure 1. Times of stimulations are indicated in figure legends. Reagents: flagellin from Salmonella typhimurium (100 ng/ml, InvivoGen, France), rm IL-1α, rm IL-17A, rm IL-17F, and rm TNFα (100 ng/ml, BioLegend, USA), S100A8 (8 (link)). Possible endotoxin contaminations of S100A8 proteins were evaluated by a sensor chromogenic LAL endotoxin assay (GenScript, USA) and were < 2 pg/µg protein.
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