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7 protocols using sd208

1

Encapsulation of Immunomodulators in PLGA Nanoparticles

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PLGA-based nanoparticles were prepared using single-emulsion evaporation. PLGA (AP041, acid end-capped, 50:50, 10–15 kDa, Akina) was blended with Mal-PEG-PLGA (AI53, diblock copolymer, 50:50, 5–10 kDa, Akina) at 25% w/w. The polymers were dissolved in 1 mL dichloromethane (Sigma) and added to 6 mL of ice-cold 0.25% PVA (30,000–70,000 g mol−1, Sigma) in 50 mM phosphate buffer, pH 5.8. The two phases were emulsified using a sonic probe (Qsonica Q700 with microtip, amplitude 10, 3 s power with 2 s break). SD-208- and R848-loaded nanoparticles were prepared by adding 10% (w/w) SD-208 (Selleckchem) or 40% (w/w) R848 (Sigma) to the solvent/polymer phase. The emulsion was stirred at room temperature for 3 h to evaporate the dichloromethane and afterwards purified by two wash-spin cycles in PBS at 20,000 g for 10 min. Nanoparticles were assessed for size distribution and zeta potential using a Zetasizer Nano series ZS90, and drug encapsulation was determined by absorbance at 370 nm (SD-208) or 280 nm (R848). The morphology of freeze-dried samples was assessed by Scanning Electron Microscopy (SEM; JSM-7800F Prime, Jeol, Japan).
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2

Investigating TGF-β Signaling Pathways

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Antibodies for E-cadherin, N-cadherin, vimentin, fibronectin, CREB1, pCREB1, pSMAD2/3, and CD44 were purchased from Cell Signaling Technology (Beverly, MA, USA). Antibodies for TGFβ1, TGFβ2, and β-actin were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The antibody for SRGN and anti-Rabbit FITC second antibody were purchased from Abcam (Cambridge, MA, USA). The recombinant human TGFβ1 and TGFβ2 protein was obtained from R&D Systems (Minneapolis, MN, USA). The TGFβ receptor I kinase inhibitor SD208 was from Selleckchem (Houston, TX, USA) and MTS (3-(4,5-dimethyl-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium, inner salt) was from Promega (Madison, WI, USA). siRNA of CD44 (siRCD44) was purchased from RiboBio (Guangzhou, China) and transformed using Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA).
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3

Intracellular Phosphorylated SMAD Analysis

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For intracellular staining of phosphorylated SMAD (pSMAD), cells were fixed in 1 mL of Lyse-Fix buffer (BD Bioscience, San Jose, CA, USA) for 10 min at 37 °C and then permeabilized on ice in permbuffer (BD Bioscience) for 30 min. Samples were washed with PBS containing 0.5% BSA and stained with 2 µL antibody per sample. For the assessment of inhibitor function, cells were seeded in 24-well plates at a density of 0.35 × 106/mL and treated with 5 ng/mL TGF-β in the presence or absence of varying concentrations of inhibitors. Apoptosis was measured with a PE-AnnexinV/7AAD apoptosis detection kit (BD Bioscience) according to the manufacturer’s instructions after overnight treatment with TGF-β (5 ng/mL; Immunotools), galunisertib (3.5 µM) or SD208 (0.5 µM) (Selleckchem, Housten, TX, USA) in the presence or absence of 100 µM ARA-C. For cell cycle staining, 0.25 × 106 pelleted cells were resuspended in 250 µL PBS/EDTA (1 mM). Samples were fixed by the addition of 750 µL absolute ethanol and overnight incubation at 4 °C. Prior to staining, cells were washed in PBS and treated with 100 µg/mL RNAse A in a total volume of 475 µL PBS/EDTA for 20 min at 37 °C. Propidium iodide (Sigma) was added to a final concentration of 50 µg/mL to distinguish between cell cycle phases in terms of cellular DNA content.
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4

Differentiation of Naïve T Helper Cells

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Isolated naïve CD4 T cells were activated with anti‐CD3/anti‐CD28 beads (Life Technologies) at a 1:5 ratio and cultured for 7 days under the following conditions: TH1, 10 ng/ml IL12 and 1 μg/ml neutralizing anti‐IL4 antibody (Ab); TH2, 20 ng/ml IL4 and 10 μg/ml neutralizing anti‐IFNγ Ab; and TH9, 10 ng/ml IL4 and 5 ng/ml TGFβ1. To generate Tregs, naïve CD4 T cells were cultured on plates coated with anti‐CD3 (5 μg/ml) and anti‐CD28 antibody (1 μg/ml) in the presence of IL2 (2 ng/ml) and TGFβ1 (5 ng/ml). All cytokines were purchased from PeproTech. All antibodies were from R&D Systems. TGFβ receptor inhibitor SD‐208 was purchased from Selleck Chemicals.
siRNA for TGFβR3, BATF, IRF4, and plasmids expressing BCL6 or ID3 were transfected into naïve CD4 T cells on day 3 after activation using the Amaxa Nucleofector system and P3 primary cell Nucleofector Kit (Lonza). TF expressions were examined on day 5 and the frequencies of cytokine‐producing cells were determined on day 7 after restimulation. siRNA were purchased from Dharmacon Inc. and plasmids were from Genscript.
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5

Inhibiting TGF-β and PPM1A Pathways in OA

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In the present study, to fully address whether canonical TGF-β/SMAD2 signaling mediated the action of PPM1A on cartilage during OA development in vivo, both 10-week-old male WT and PPM1A-KO mice were treated with SD-208 (Selleck, CAS 627536-09-8; 20 μM), a specific inhibitor of TGFβRI, by intraarticular injection with a volume of 10 μL twice a week for 8 weeks after DMM operations. In addition, for the PPM1A-inhibitor treatment study, 10-week-old male C57BL/6J mice that received DMM operation were intraarticularly injected with PPM1A inhibitors, SC (MUST, CAS 5578-73-4; 5 μM) and BC-21, also known as NSC109268 (Millipore Sigma, CAS 691005-38-6; 100 μM), respectively. Specifically, 10 μL of inhibitor or PBS as vehicle was injected into the right knee joint cavity every 5 days for 8 weeks.
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6

Inhibition of TGF-β Signaling Pathway

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EW7197 (Vactosertib, Catalog No.S7530) and SD208 (Catalog No.S7530) were purchased from SelleckChem. CH5126766 (CKI) was from Chugai Pharmaceutical Co. Follistatin was purchased from Shenandoah Biotechnologies Inc. The TGFB1 neutralizing antibody 1D11 and its isotype control were obtained from the MSKCC MAB Core.
For in vivo experiments, CKI was dissolved in 2 hydroxypropyl-β-cyclo-dextrin and administered once daily by oral gavage at a dose of 3.0 mg/kg. EW7197 was dissolved in artificial gastric fluid formulation (95 mM HCl, 38 mM NaCl and 3.6 mg/mL pepsin) and administered once daily by oral gavage at a dose of 25 mg/kg. Follistatin was dissolved in sterile H2O and administered once daily by i.p. injection at a dose of 25 µg/kg. The TGFB1 neutralizing antibody 1D11 and isotype control were suspended in sterile saline and administrated once every 2 days at a dose of 10 mg/kg.
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7

Fibroblasts and SW620 Cells Treatment

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The fibroblasts were maintained in Dulbecco’s modified Eagle medium (DMEM) (Gibco, Waltham, Massachusetts, USA, that was supplemented with 10% FBS (Sigma, St. Louis, Missouri, USA and penicillin-streptomycin (Sigma). The fibroblasts were treated with vehicle (DMSO, Sigma) or equal volumes of GANT61 (10 μM, Selleckchem, Houston Texas, USA, SIS3 (1–5 μM, Selleckchem), FH535 (10 μM, Tocris), NPPB (25 μM, Sigma), and IAA-94 (50 μM, Sigma) for 48 h at 37 °C and 5% CO2.
SW620 cells were obtained from ATCC. The cells were engineering by CRISPR/Cas9 to introduce a truncation in the PTCH1 coding sequence (PTCH1mut) using short guide RNA (sgRNA) targeting the region of interest (D1222fs) or an irrelevant scrambled sequence (WT PTCH1) and selected using puromycin for 72 h. The cells were sequence-verified. For the indicated treatments, the SW620 clones were incubated with GANT61 (20 µM) or SD208 (10 µM, Selleckchem) or equal volumes of DMSO for 24 h.
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