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11 protocols using l 6200

1

Radiosynthesis of Carbon-11 Labeled Compounds

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Unless otherwise stated, all reagents and solvents were obtained from Sigma‐Aldrich (Sweden) and used without further purification. No‐carrier‐added [11C]CO2 production was performed using a GEMS PETtrace cyclotron (GE, Uppsala, Sweden). The 14N(p, α)11C reaction was employed in a pressurized gas target containing nitrogen (nitrogen 6.0) and 1% oxygen (oxygen 4.8) by bombardment with a proton beam (16.5 MeV). HPLC was performed using a Hitachi L‐6200 gradient pump and a Hitachi L‐4000 variable wavelength UV‐detector in a series with a Bioscan β+‐flow detector. Analytical HPLC was performed using a Hitachi L‐6200 gradient pump and a Hitachi L‐4000 variable wavelength UV‐detector in series with a Bioscan β+‐flow detector. The reverse phase column (Agilent Eclipse XDB‐C18, 5 μm, 4.6 × 150 mm) was eluted with a gradient between acetonitrile (A) and 100mM HCO2NH4 (B). The gradient was linear between 10% and 90% (B) over 5 min at a flow rate of 3 ml/min. Identification of all radioactive products was confirmed by co‐elution with the corresponding nonradioactive compound.
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2

Quantification of Brazilin by LC-MS

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Liquid chromatography-mass spectrometry (LC-MS) (Mariner Biospectrometry workstation [McKinley Scientific, Sparta, NJ], Hitachi L-6200 [Hitachi, Tokyo, Japan]) was performed using a Supelco reversed-phase C-18 column (250 mm × 2 mm, 5 μm; Sigma-Aldrich) with an electrospray ionization (ESI) system (positive ion mode). The ESI mass spectrum was presented at 287 mass-to-charge ratio, corresponding to the [M+H]+ of brazilin (molecular weight, 286 g/mol).
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3

Protein Sequence Analysis by CNBr Cleavage

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The purified CGL1 was reduced with tri-n-butylphosphine in 7M guanidine-HCl, 10 mM EDTA, 0.5 M Tris-HCl pH 8.5. The reduced CGL1 was pyridylethylated with 4-vinyl pyridine at 25 °C for 4 h in the dark. The reduced and pyridylethylated CGL1 was chemically cleaved at the methionyl bonds with 1% CNBr in 70% (v/v) formic acid at 25 °C for 24 h by the method of Gross28 (link)35 (link)36 (link). The peptides generated by the CNBr cleavage were separated by reverse-phase high-performance liquid chromatography (RP-HPLC) using HITACHI model L-6200 and L-4200 liquid chromatographs on a Wakosil-II 5C18 AR column (4.6 × 100 mm, Wako Pure Chemical Industries Ltd., Osaka, Japan). The column was equilibrated with solvent A (0.1% trifluoroacetic acid; TFA), and the peptides were eluted at the flow rate of 1 mL/min using a linear gradient of 0–100% solvent B (acetonitrile/water/TFA, 80:20:0.1 [v/v/v]) at room temperature. The separated fractions were collected for sequencing. Automated Edman degradation37 (link)38 39 (link)40 (link) was performed using a gas phase protein sequencer (Shimadzu model PPSQ-21).
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4

High-Speed Counter-Current Chromatography

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The mobile phase of solvent system was selected to organic lower phase. The multilayer coil column was filled first with the stationary phase. Then, the mobile upper phase was pumped into the column by a chromatographic pump (L-6200, Hitachi, Japan) at a flow rate of 3 mL/min while preparative HSCCC apparatus (TBE-1000A, Shanghai Tauto Biotech, Co., Ltd., China) was rotated at a revolution speed of 500 rpm. After hydrodynamic equilibrium was established, prepared sample solution was subjected to HSCCC apparatus. The monitoring of HSCCC peak fractions was performed by combining effluent line of the HSCCC apparatus to the UV detector (UV/VIS-151, Gilson Inc., Middleton, WI, USA) at 330 nm. The eluent from the UV detector was collected by a fraction collector (FC-204, Gilson Inc.) in 3 min per each test tube. HSCCC systems were kept the internal column temperature at 25°C by circulatory temperature regulator (RW-0525G, Jeio Tech., Korea).
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5

Serum Albumin Oxidation in Hemodialysis

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Chromatographic analysis of serum albumin in haemodialysis patients was performed as described previously24 (link). High-performance liquid chromatography (HPLC) analysis of 5 μL aliquots of each serum sample was performed using a Shodex Asahipak ES-502N column (Showa Denko Co., Ltd., Tokyo, Japan; column temperature, 35 ± 0.5 °C). The HPLC system was composed of an intelligent pump (L-6200) equipped with a gradient programmer and an F-1050 fluorescence detector (Hitachi Co., Ltd., Tokyo, Japan). Elution was performed using a linear gradient with increasing ethanol concentrations from 0% to 5% for serum in 0.05 mol/L of sodium acetate and 0.40 mol/L of sodium sulfate mixture (pH 4.85) at a flow rate of 1.0 mL/min. From the HPLC profiles of serum albumin, the value of oxidized albumin content was estimated by dividing the area of oxidized albumin by the total area corresponding to albumin. The serum level of 8-isoprostane was measured using an enzyme-linked immunosorbent assay kit (Detroit R&D Inc. Detroit, MI, USA).
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6

Extraction and Characterization of VYE

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V. yedoensis was purchased from a store in Taichung, Taiwan, and VYE was prepared as previously described 16 (link). Air-dried whole plant (100 g) was boiled at 70 °C for 24 h with 500 mL of 50% ethanol. The solvent was removed, and the filtrate was lyophilized and stored at -20 °C. The recovery ratio of VYE is 17.68 %. Furthermore, the chemical profile of VYE was analyzed by using high-pressure liquid chromatograms (HPLC)-mass spectrometer. Briefly, VYE was analyzed by HPLC-mass spectrometer using a HPLC (Hitachi L-6200 with an L-4500 Diode Array detector) with a PE Sciex Qstar Pulsar ESI-TOF mass spectrometer. Samples (10 μl) were injected into a Merck LiChrospher 100 RP-18 column (4 mm×250 mm). The column was equilibrated in 0.05% acetic acid/water (solution A), and elution of the components was performed by increasing the concentration of acetonitrile (solution B) from 0% to 60% in 30 min at a flow rate of 1 ml/min. Absorbance was monitored at 254 nm.
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7

Protein Purification by Chromatography

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The samples obtained by ion-exchange chromatography were concentrated using Amicon Ultra-15 10 K filters (Merck Millipore, Burlington, MA, USA) and gel-filtration chromatography (TOSOH G3000SW) connected to high-pressure liquid chromatography (HPLC) (Hitachi L-6200) for further purification (flow rate: 0.5 mL/min). Elution fractions (0.5 mL/fraction) from gel-filtration chromatography were used to perform CBB staining and immunoblotting after resolving the proteins by SDS-PAGE as described earlier.
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8

Protein Purification by Chromatography

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Samples obtained from ion-exchange chromatography were concentrated using Amicon Ultra-15 10K filters (Millipore) and subjected to gel-filtration chromatography (TOSOH G3000SW) using high performance liquid chromatography (HPLC; Hitachi L-6200) for further purification (flow rate: 0.5 mL/min). Elution fractions (0.5 mL/fraction) from gel-filtration chromatography were used to perform CBB staining and immunoblotting after resolving the proteins via SDS-PAGE as described above.
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9

Chiral and Reversed-Phase HPLC Analysis

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The employed HPLC units were:

Chiral HPLC analysis: a Merck-Hitachi (Hitachi Ltd., Tokyo, Japan), equipped with a UV detector model L-4250, pump system model L-6200 and a chromato-integrator model D-2500. The column employed in the analyses was a Phenomenex Lux-Cellulose 1 (Phenomenex, Torrance, CA, USA). The dimension of the column is 250 mm × 4.6 mm, 3 µm. The elution was in isocratic mode with the indicated eluant and flow. All the samples were measured at λ = 254 nm and 25 °C.

RP-HPLC analysis: Agilent 1100 system (Agilent Technologies, Waldbronn, Germany) equipped with a Zorbax SB-C18 column (150 mm × 3.0 mm, 3.5 µm) for 1 and with a Supelco Discovery C18 (250 mm × 4.6 mm, 5.0 µm) for 7.

All the samples were measured at λ = 254 nm and 25 °C.
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10

Pyridylethylation and CNBr Cleavage of AJLec

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The purified AJLec was reduced with tri-n-butylphosphine in 7 M guanidine-HCl, 10 mM EDTA, and 0.5 M Tris-HCl (pH 8.5) and pyridylethylated by treatment with 4-vinyl pyridine at 25 °C for 4 h in the dark. The resulting pyridylethylated AJLec was chemically cleaved at methionyl bonds with 1% CNBr in 70% (v/v) formic acid at 25 °C for 24 h by the method described by Gross31 (link). The peptides generated by CNBr cleavage were separated by reverse-phase HPLC using HITACHI model L-6200 and L-4200 liquid chromatographs on a Wakosil-II 5C18 AR column (4.6 × 100 mm, Wako Pure Chemical Industries Ltd., Osaka, Japan). The column was equilibrated with solvent A (0.1% trifluoroacetic acid; TFA), and the peptides were eluted at a flow rate of 1 mL/min using a linear gradient of 0–100% solvent B (acetonitrile/water/TFA, 80:20:0.1 [v/v/v]) at room temperature. Amino acid sequences of the separated peptides were determined using a PPSQ-21 protein sequencer (Shimadzu).
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