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5 protocols using mouse anti brdu antibody

1

In Vivo Cell Proliferation Analysis

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To study in vivo cell proliferation, mice received daily i.p. injections of BrdU (50 mg/kg) (Sigma) on days 25 until 27 p.i, and brain tissues were harvested at day 28 p.i. Proliferating cells were identified by using a mouse anti-BrdU antibody (1:500, Thermo Fisher Scientific, Waltham MA, USA) following experimental procedure recommended by the manufacturer. Briefly, brain sections were pretreated 10 min in paraformaldehyde (PFA) 4%, rinsed in PBS, and incubated 30 min in a solution of 2 N HCL. Slides were rinsed twice in PBS, and sections were incubated 10 min at 37 °C with the 0.1% trypsin. Slides were rinsed three times in PBS and then stained with anti- BrdU antibody.
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2

Immunohistochemical Analysis of Neural Markers

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Rabbit anti-Ki67 antibody (Cat #PA1–21520; dilution 1:500 for IF), Mouse anti-BrdU antibody (Cat #MS-1058-P0; dilution 1:500 for IF), Rabbit anti-NeuN antibody (Cat #711054; dilution 1:500 for IF), Rabbit anti-Nestin antibody (Cat # PA5–11887; dilution 1:500 for IF), anti-DCX antibody (Cat # 48–1200; dilution 1:500 for IF), and anti-BMP4 antibody (Cat # PA5–27288; dilution 1:500 for IF) were purchased from ThermoFisher. Rabbit anti-MAP2 (Cat # AB5622; dilution 1:500 for IF) was obtained from EMD Millipore. Mouse anti-PPARα antibody (Cat # sc-398394; dilution 1:500 for IF) was bought from Santa Cruz Biotechnology. BrdU, chemically known as 5-Bromo-2′-deoxyuridine (Cat #B5002–1G) was purchased from Sigma. Recombinant EGF (Cat # 236-EG) and FGF (Cat #233-FB) were purchased from R&D system.
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3

Replication Fork Blockage Assay

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For replication fork blockage purpose in the presence of 5hmdC, 5hmdU or their combinations with olaparib, we modified the incubation periods to 60 min to maximize 5hmdC or 5hmdU uptake by cells. Cells were firstly pulsed with 25 μM CldU for 30 min, washed and incubated in medium containing 50 μM IdU in the presence of 5hmdC, or 5hmdU for 60 min. DNA fibers were incubated with rat anti-BrdU antibody (AbD Serotec, 1:1000) and mouse anti-BrdU antibody (Bu20a,1:500) and stained with goat anti-rat alexa-488 (Invitrogen Inc.) and goat anti-mouse Alexa555 antibody (Invitrogen Inc.) for 2 h respectively and mounted using Prolong Antifade medium (Invitrogen Inc.).
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Zebrafish Larval and Cell Culture BrdU Assay

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At 68 h after doxycycline inducement, zebrafish larvae were incubated in 10 mM BrdU (Sigma, St. Louis, MO, USA) in 1% DMSO for four hours at 28.5 °C, then anesthetized in tricaine and fixed with 4% paraformaldehyde for two hours at RT. The fixed embryos were then sent for cryosectioning. Sections were treated with 2 N HCl for 1 h at RT, blocked 1 h with blocking solution, then incubated with mouse anti-BrdU antibody (Invitrogen) overnight at 4 °C. The next day, after a 1-h wash with PBST, the sections were further incubated with secondary goat anti-mouse IgG antibody. For cell culture analysis, Hep3B cells were incubated with BrdU at a final concentration of 20 μM for 2 h. After a PBS wash, cells were fixed with 4% PFA for 5 min, permeabilized with acetone:methanol (1:1) for 3 min on ice, then rehydrated in PBS for 5 min. The following denaturing and antibody incubation steps were similar to those of the staining of the cryosections.
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5

Cell Proliferation Assay by BrdU Incorporation

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WT and MDPL-HDFs were cultured and treated with cisplatin for 24 hours. After 24 and 48 hours from the end of treatment, cells were incubated for 6 hours with 10 μM BrdU (Life Technologies Corporation). Then they were collected, fixed with cold ethanol 90%, added with 1 mL of 2 N HCl + 0.5% Triton X-100 and resuspended with 1ml of 0,1 M borate buffer. Finally, pelleted cells were suspended with 200 μl of washing buffer + 1:50 mouse anti-BrdU antibody (Invitrogen, Life Technologies Corporation, CAT#33900, RRID: AB_86146) and incubated for 45 min at room temperature followed by two washes. Subsequently cells were incubated with FITC-conjugated secondary antibody (1:800) for 30 min at +4° C. For DNA content assay, cells were successively stained with propidium iodide (Sigma-Aldrich, St. Louis, MO, USA). Cytofluorimetric acquisition was done on a on a Gallios instrument using Kaluza G Acquisition software and the analyses were performed using Kaluza Analysis Software v.2.1 (all from Beckman Coulter, Inc.).
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