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5 protocols using tgf β alk inhibitor a83 01

1

Murine Basal and Luminal Cell Culture

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FACS-isolated basal and luminal cells from WT and Pb-Csf1 mice were cultured in Corning® Matrigel® Basement Membrane Matrix (Corning, Tewksbury, MA) with advanced DMEM/F12 supplemented with B27 (Life technologies, Grand Island, NY), 10 mM HEPES, glutamax (Life technologies, Grand Island, NY), penicillin/streptomycin, and the following growth factors: EGF 50 ng/ml (Peprotech, Rocky Hill, NJ), 500 ng/ml recombinant R-spondin1 (Peprotech, Rocky Hill, NJ), 100 ng/ml recombinant Noggin (Peprotech, Rocky Hill, NJ), 200 nM of TGF-β/Alk inhibitor A83-01 (Tocris, Ellisville, MO), and 10 μm Y-27632 (Tocris, Ellisville, MO). Dihydrotestosterone (DHT) (Sigma, St. Louis, MO) was added to a final concentration of 1 nM.
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2

Prostate Organoid Culture Protocol

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The organoid culture was performed as described previously (Karthaus et al., 2014 (link)). Briefly, dissociated prostate cells from 8-12 week-old C57B1/6 mice were cultured in DMEM/F12 supplemented with B27 (Life technologies, Grand Island, NY), 10 mM HEPES, Glutamax (Life technologies, Grand Island, NY), Penicillin/Streptomycin, and the following growth factors: EGF 50 ng/ml (Peprotech, Rocky Hill, NJ), 500 ng/ml recombinant R-spondin1 (Peprotech, Rocky Hill, NJ), 100 ng/ml recombinant Noggin (Peprotech, Rocky Hill, NJ), 200 μM TGF-β/Alk inhibitor A83-01 (Tocris, Ellisville, MO), and 10 μM Y-27632 (Tocris, Ellisville, MO). Dihydrotestosterone (Sigma, St. Louis, MO) was added at 1 nM final concentration. Cells were resuspended in growth factor reduced matrigel (Corning, Corning, NY) and plated in 96-well plates.
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3

Murine and Human Prostate Organoid Culture

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Murine prostates were divided into three lobe pairs; AP, DLP and VP. Lobes were enzymatically digested with collagenase type II (Gibco) and subsequently with TrypLE (Gibco). Cells were seeded in growth factor reduced Matrigel (Corning) and overlayed with medium containing the growth factors: EGF 5–50 ng/ml (Peprotech), R-spondin1 conditioned medium or 500 ng/ml recombinant R-spondin1 (Peprotech), Noggin conditioned medium or 100 ng/ml recombinant Noggin (Peprotech) and the 200 nM TGF-β/Alk inhibitor A83-01 (Tocris). Dihydrotestosterone (DHT) (Sigma) was added at 0.1–1 nM. Human prostate samples were obtained from patients undergoing radical prostatectomy according to guidelines from the UMC Utrecht. Prostate tissue was enzymatically digested with collagenase type II and subsequently with TrypLE. Cells were seeded in growth factor reduced Matrigel and cultured in medium containing growth factors as above, with the addition of 10 ng/ml FGF10 (Peprotech), 5 ng/ml FGF2 (Peprotech), 1 µM Prostaglandin E2 (Tocris), 10 µM SB202190 (Sigma-Aldrich), 10 mM Nicotinamide (Sigma-Aldrich) and DHT 0.1–1 nM. For detailed summary of culture medium composition see supplementary methods.
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4

Prostate Organoid Culture Methodology

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Organoid assay was performed as has been described previously.18 (link) FACS-isolated basal cells, Sca-1+ luminal cell, eYFP+ Sca-1 luminal cells, and eYFP Sca-1 luminal cells from Pbsn-eYFP mice or FACS-isolated Sca-1 and Sca-1+ luminal cells from WT-Sox2 and K8-Sox2 mice were cultured in Corning Matrigel Growth Factor Reduced Basement Membrane Matrix (Corning, Tewksbury, Massachusetts) with advanced DMEM/F12 supplemented with B27 (Life Technologies, Grand Island, New York), 10 mM HEPES, glutamax (Life Technologies), penicillin/streptomycin, and the following growth factors: EGF 50 ng/mL (Peprotech, Rocky Hill, New Jersey), 500 ng/mL recombinant R-spondin1 (Peprotech), 100 ng/mL recombinant Noggin (Peprotech), 200 nM of TGF-β/Alk inhibitor A83–01 (Tocris, Ellisville, Missouri), and 10 μm Y-27632 (Tocris). Dihydrotestosterone (Sigma) was added to a final concentration of 1 nM.
To collect organoids for histological and IHC analyses, 1 mg/mL dispase (Invitrogen) was added and incubated for 1 hour at 37°C. Organoids were then fixed using 10% formalin for 10 minutes and resuspended in 50 μL of Richard-Allan Scientific HistoGel Specimen Processing Gel (Thermo Fisher Scientific) for preparation of paraffin embedded blocks.
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5

Murine Basal and Luminal Cell Culture

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FACS-isolated basal and luminal cells from WT and Pb-Csf1 mice were cultured in Corning® Matrigel® Basement Membrane Matrix (Corning, Tewksbury, MA) with advanced DMEM/F12 supplemented with B27 (Life technologies, Grand Island, NY), 10 mM HEPES, glutamax (Life technologies, Grand Island, NY), penicillin/streptomycin, and the following growth factors: EGF 50 ng/ml (Peprotech, Rocky Hill, NJ), 500 ng/ml recombinant R-spondin1 (Peprotech, Rocky Hill, NJ), 100 ng/ml recombinant Noggin (Peprotech, Rocky Hill, NJ), 200 nM of TGF-β/Alk inhibitor A83-01 (Tocris, Ellisville, MO), and 10 μm Y-27632 (Tocris, Ellisville, MO). Dihydrotestosterone (DHT) (Sigma, St. Louis, MO) was added to a final concentration of 1 nM.
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