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Anti phospho nf κb p65 ser536 93h1

Manufactured by Cell Signaling Technology
Sourced in United States

The Anti-phospho-NF-κB p65 (Ser536) (93H1) is a rabbit monoclonal antibody that recognizes the phosphorylated form of the NF-κB p65 subunit at serine 536. This antibody is intended for use in various applications, such as Western blotting, immunoprecipitation, and immunohistochemistry, to detect the phosphorylated state of the NF-κB p65 protein.

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7 protocols using anti phospho nf κb p65 ser536 93h1

1

Western Blotting of NF-κB Pathway

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Western blotting was performed as previously described (Chen et al., 2002 (link); Xiao et al., 2019 (link)). Antibodies anti-myeloid differentiation primary response gene 88 (MyD88) (D80F5; #4283), anti-phospho-IKKα/β (Ser176/180) (16A6; #2697), anti-IKKα (#2682), Phospho-IKKα/β (Ser176/180) (16A6, #2697), anti-IκBα (44D4,#4812), anti-Phospho-IκBα (Ser32/36) (5A5, #9246), anti-NF-κB p65 (D14E12, #8242) and anti-Phospho-NF-κB p65 (Ser536) (93H1, #3033) were purchased from Cell Signaling Technology.
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2

Cytoplasmic and Nuclear Protein Extraction

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For cytoplasmic and nuclear extracts, Caco‐2 cells were harvested, washed in cold PBS twice, and centrifuged at 3,300 g for 5 min in cold room to collect pellets. Pellets were resuspended in double cell volume of cytoplasmic extract (CE) buffer [10 mM HEPES, pH 7.9, 10 mM KCl, 0.1 mM EDTA, 0.3% NP‐40, and 1× protease inhibitor cocktail (Thermo Scientific™)], incubated on ice for 10 min and centrifuged at 800 g for 5 min to obtain the supernatants as cytoplasmic fraction. The pellets (containing the nuclei) were resuspended in equal volume of nuclear extract (NE) buffer (20 mM HEPES, pH 7.9, 0.4 M NaCl, 1 mM EDTA, 25% glycerol, and 1× protease inhibitor cocktail), incubated on ice for 10 min, and centrifuged at 16,100 g for 5 min to obtain the supernatants as nuclear fraction. The protein concentrations were measured by Bradford protein assay (Protein Reagent, Bio‐Rad). For Western blots, cytoplasmic and nuclear proteins were fractionated on 10% SDS–PAGE and transferred to nitrocellulose blotting membranes (Amersham™Protran™ 0.45 μm NC, GE Healthcare, Life science). Membranes were incubated with anti‐phospho‐NF‐κB p65 (Ser536; (93H1), Cell Signaling, #3033), 1:1,000, Lamin B1‐Nuclear Envelope Marker (Abcam, ab16048) 1:5,000, and anti‐β‐actin (Cell Signaling, #4970) 1:1,000.
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3

Analyzing Inflammasome Signaling in Neutrophils

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A total of 106 neutrophils were lysed and analyzed by Western blotting as previously described (26 (link)) using the following antibodies: anti-IL-1β (3ZD; National Cancer Institute Biological Resources), anti-NLRP3 (D2P5E; Cell Signaling), anti-caspase-1 (Cell Signaling), anti-NF-κB p65 (D14E12; Cell Signaling), anti-phospho-NF-κB p65 (Ser536) (93H1; Cell Signaling), anti-IκBα (L35A5; Cell Signaling), anti-MyD88 (D80F5; Cell Signaling), anti-TRAF6 (D21G3; Cell Signaling), anti-IKKα (Cell Signaling), anti-IKKβ (2C8; Cell Signaling), anti-phospho-IKKα/β (Ser176/180) (16A6; Cell Signaling), anti-CREB1 (48H2; Cell Signaling), anti-phospho-CREB (Ser133) (87G3; Cell Signaling), anti-C/EBPβ (Cell Signaling), anti-phospho-C/EBPβ (Thr235) (Cell Signaling), or anti-β-actin (AC-15; Sigma-Aldrich). Peroxidase-conjugated secondary antibodies were used (BioLegend). Membranes were developed using ECL (Thermo Scientific) and detected using a Nikon camera as previously described (79 (link)). Quantification analysis of blots was performed using ImageJ, and β-actin was used as a loading control. The results for samples were expressed as a percentage of the value for the positive control (LPS or LPS+ATP group).
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4

Western Blot Analysis of Cell Signaling Pathways

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Cells (1×105) were washed once with PBS, lysed in 100 μl SDS loading buffer (100 mM Tris-Cl pH 6.8, 4% sodium dodecyl sulfate, 0.2% bromophenol blue, 20% glycerol, and 2% β-mercaptoethanol) and sonicated for 5 min. The samples were boiled for 5 min and subjected to SDS-PAGE, and the separated proteins were transferred onto a PVDF membrane (Merck Millipore) that had been incubated with 1:1,000-diluted primary antibody and then with HRP-conjugated anti-mouse or anti-rabbit antibody (Cell Signaling), as recommended by the manufacturers. Primary antibody binding was detected using a Clarity™ Western ECL substrate (Bio Rad, Hercules, CA, USA), and images were captured by a CCD camera (Fuji Film, Tokyo, Japan). The following primary antibodies were used: anti-pERK (20G11, Cell Signaling), anti-ERK (137E5, Cell Signaling), anti-phospho-Akt (Thr308) (C31E5E, Cell Signaling), anti-Akt pan (C67E7, Cell Signaling), anti-phospho-FAK (Tyr925) (Cell Signaling), anti-FAK (Cell Signaling), anti-phospho-NF-κB p65 (Ser536) (93H1, Cell Signaling), anti-NF-κB p65 (D14E12, Cell Signaling), and anti-α-tubulin (B-5-1-2, Santa Cruz Biotechnology, Dallas, TX, USA).
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5

Comprehensive Antibody Panel for Investigating DNA Damage Response

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Antibodies included anti-Histone H3 (Abcam, ab1791), anti-Histone H3 (trimethyl K4) (Abcam, ab8580), anti-γH2A.X (phospho-S139) (Abcam, ab2893), anti-IL1α (Abcam, ab9614), anti-IL6 (Developmental Studies Hybridoma Bank, CPTC-IL6-1), anti-phospho-NF-κB p65 (Ser536) (93H1) (Cell Signaling, 3033), anti-ATM (Bethyl Laboratories, A300-299), anti-MLL1 (Bethyl Laboratories, A300-086A), anti-ATM (phospho-S1981) (Abcam, ab81292), anti-β-Tubulin (Sigma, T8328), anti-Ras (Millipore, 05-516), anti-p53 (Pantropic) (Calbiochem, OP43), anti-ATR (Bethyl Laboratories, A300-137A), anti-phospho-p53 (Ser15) (Cell Signaling, 9284), and anti-CDKN2A/p16INK4a (Abcam, ab16123).
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6

Andrographolide Signaling Pathway Assay

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Andrographolide (purity >99%) was purchased from Sigma-Aldrich. It was dissolved in 100% DMSO (dimethyl sulfoxide) and kept at -80 °C. Andrographolide was diluted to the final concentration of less than 0.1% of DMSO. Antibodies were obtained from Cell Signaling Technology including anti-phospho-Akt (Ser473) (D9E) XP® (#4060), anti-phospho-MEK1/2 (Ser217/221) (41G9) (#9154), anti-phospho-NF-κB p65 (Ser536) (93H1) (#3033), anti-phospho-SAPK/JNK (Thr183/Tyr185) (G9) (#9255) and anti-phospho-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (D13.14.4E) XP®. The following antibodies: anti-phospho-p38 MAPK (pThr180 + Tyr182) (S.417.1) (Thermo Fisher), anti-caspase-3 (BioVision), anti-tyrosine hydroxylase (TH, sc-25269) and anti-β tubulin (JDR.3B8) (Santa Cruz) were obtained from the stated respective companies.
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7

Western Blot Analysis of Cell Signaling

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Whole-cell lysates were harvested using HyTra Cell Protein Extraction Reagent (Goal Bio, Taipei, Taiwan) containing Proteinase Inhibitor Cocktail (Bionovas, Taipei, Taiwan) and immunoblotted. The protein lysates were resolved on 10% polyacrylamide sodium dodecyl sulfate (SDS) gels. The following antibodies were used for immunoblotting—anti-IκBα (L35A5), anti–NF-κB p65(D14E12), anti-Phospho-NF-κB p65 (Ser536) (93H1) and anti-cleaved caspase-3 (Asp175) (5A1E) were from Cell Signaling (Danvers, MA, USA); anti-p53 Ab-6(Clone DO-1) was from Thermo scientific (Fremont, CA, USA); anti-PSMD4, anti-PSMB4 and anti-ACTB were from Atlas Antibodies (Stockholm, Sweden).
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