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Ethylene diamine tetraacetic acid (edta)

Manufactured by Euromedex
Sourced in France

EDTA is a chemical compound commonly used as an anticoagulant in laboratory settings. It functions by chelating metal ions, which helps prevent blood clotting during sample collection and handling.

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3 protocols using ethylene diamine tetraacetic acid (edta)

1

Cardiac Stromal Cell Isolation Protocol

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Cardiac stromal cells were incubated for 15 min at 4 °C in blocking buffer (DPBS (SIGMA) with 4% HIFCS, 3% mouse serum (SIGMA), 3% rat serum (SIGMA), and 2 mM EDTA (Euromedex, Souffelweyersheim, France)) with 5 µg/mL anti CD16/CD32 (Biolegend, Ozyme) as previously described [31 (link)]. Cells were then incubated on ice with conjugated monoclonal antibodies and diluted at their optimal concentrations (Supplementary Table S2) in FACS buffer (DPBS with 4% HIFCS, 2 mM EDTA) for 30 min (FACS) or 45 min (cell sorting). Necrotic cells were excluded by staining with Live/Dead Aqua or Live Dead Yellow fluorescent reactive dyes (Life Technologies, Thermo Fisher Scientific).
Cardiac stromal cell subsets were isolated by high-speed sorting with the BD InfluxTM cell sorter (BD Biosciences, Allschwil, Switzerland) and cMSCs were cell sorted based on CD45 CD31 Sca-1+ CD140a+ expression, macrophages on CD45+ CD64+ MHCII+ and vascular ECs were cell sorted on CD45 CD140a CD31+ Sca-1+ expression (Supplementary Table S2).
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2

Cell Lysis by Sonication and Soluble Extract Preparation

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Cell lysis was done by sonication. Samples were resuspended in 3 mL of lysis buffer containing 50 mM Hepes-KOH (Euromedex), 200 mM KCl (Euromedex), 1 mM EDTA (Euromedex), 10% glycerol (Roth), 1 mM benzamidine (Sigma), 5 mM aminocaproic acid (Sigma), 1 mM NAD + (Sigma). To precipitate DNA, 0.2 % of sulfate streptomycin was added and samples were centrifuged for 25 min at 13,000 x g at 4°C. The supernatant sample, corresponding to soluble extract, was frozen in liquid nitrogen and conserved at -80°C.
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3

Binding Assay for CL-LK Interaction

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All binding experiments were performed in TBS buffer (20 mM Tris, 125 mM NaCl, 2 mM CaCl2) containing 0.5 mg/mL BSA (Sigma). Non-specific binding to M. tuberculosis was prevented by incubating the bacteria for 30 min at room temperature in TBS buffer containing 2 mg/mL BSA. Bacteria were then incubated with native CL-LK (5 μg/mL, prepared as in [17 (link)]) at 37°C for 1 h in the presence or absence of 20 mM EDTA (Euromedex) or 50 mg/mL purified mannan. After washing in TBS, bacteria were incubated with a biotinylated monoclonal anti-CL-K1 antibody (HYB14-29 [18 (link)]) at 2 μg/ml for 1 h at room temperature. Secondary detection was achieved using APC-coupled Streptavidin (eBioscience) (for 20min at room temperature). Bacteria were then washed and fixed for 2 h at room temperature in PBS containing 4% paraformaldehyde (Polyscience)
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