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12 protocols using α smooth muscle actin α sma

1

Western Blot Analysis of Cell Signaling

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Protein lysates from cells receiving different treatments were prepared using RIPA buffer (Beyotime, Shanghai, China) containing protease and phosphatase inhibitors (KeyGEN, Nanjing, China). Equal amounts of total protein (30 μg of protein per lane) were loaded onto gels for electrophoresis and then transferred onto PVDF membranes (Millipore, Billerica, USA), followed by incubation in blocking buffer (25 mM Tris, pH 7.4, 0.15 M NaCl, 0.1% Tween-20, 5% nonfat milk) for 1 h at RT. The membranes were incubated with primary antibodies against α-smooth muscle actin (α-SMA) (Proteintech, Chicago, USA), IL-25 (R&D, Minneapolis, USA), total ERK1/2, phospho-ERK1/2, total AKT, phospho-AKT, phospho-B-Raf (Cell Signaling Technology, Boston, USA) or GADPH (Proteintech, Chicago, USA) at 4 °C overnight. After washing, the membranes were incubated with HRP-conjugated secondary antibodies for 1 h at RT. Proteins were visualized with an ECL kit (Advansta, CA, USA). GADPH was used as a loading control. The intensity of Western blotting bands was analyzed with Quantity One v4.6.2 software.
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2

Western Blotting for Colorectal Cancer Cell Analysis

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Colorectal cancer cells were dissolved in RIPA (Thermo Fisher Scientific, Waltham, MA, USA). Approximately 40 μg total protein was separated by 10% SDS‐PAGE and then transferred onto PVDF membranes (Millipore, Billerica, MA, USA). Membranes were blocked with 10% blocking solution (Roche, Basel‐Stadt, Switzerland) and incubated with primary antibodies overnight at 4°C, followed by incubation with secondary antibody for 1 h at room temperature. The bands were detected using the Odyssey Infrared Imaging System (LI‐COR Biosciences, Lincoln, NE, USA). The following primary antibodies were used: NUBPL (SAB1408017, Sigma‐Aldrich), E‐cadherin, α‐catenin, N‐cadherin, vimentin, fibronectin, α‐smooth muscle actin (α‐SMA) (all from Proteintech, Rosemont, IL, USA), ERK, phospho‐ERK (both from Cell Signaling Technology, Danvers, MA, USA), and GAPDH (Kangchen Bio‐tech, Shanghai, China).
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3

Protein Expression Analysis in Liver Cells

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Liver tissue lysates or lysates of transfected 293T cells, with each loading sample containing 30 μg total protein (Determined by Bradford assay), were analyzed by using 12% SDS-PAGE gel. Resolved proteins were electro-transferred to polyvinylidene difluoride (PVDF) membranes. The membranes were blocked for 2 h with 5% nonfat milk at room temperature and then probed with antibody specific to HA Tag (ProteinTech Group, Inc.), collagen I (ABZoom Inc.), α-smooth muscle actin (α-SMA; ProteinTech Group, Inc.), TGF-β (ProteinTech Group, Inc.), GAPDH (ProteinTech Group, Inc.) or β-actin (ProteinTech Group, Inc.).
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4

Western Blot Analysis of NLRP3 Inflammasome Pathway

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Kidney tissue and NRK-52E cells were lysed in RIPA lysis buffer (Beyotime, Shanghai, China) containing PMSF and centrifuged at 12,000 × g for 20 min at 4 °C. Equal amounts of protein (renal tissue protein: 20 μg, cellular proteins: 15 μg) were separated by SDS-PAGE, the gel was transferred to a PVDF membrane, and blocked with rapid blocking solution (Xin Saimei) for 10 min. The membranes were incubated at 4 °C with primary antibodies against NLRP3 (1:1000, Proteintech, Rosemont, IL), caspase-1 (1:500, Proteintech, Rosemont, IL), GSDMD (1:1000, GeneTex, Irvine, CA), IL-1β (1:500, Abcam, Cambridge, UK), α-smooth muscle actin (α-SMA) (1:1000, Proteintech, Rosemont, IL), vimentin (1:1000, Proteintech, Rosemont, IL), and fibronectin (1:1000, Proteintech, Rosemont, IL) overnight. The membranes were washed three times with TBST for 10 min, diluted secondary antibody (1:10,000, Zenbio, Durham, NC) was added, and the membranes were incubated at room temperature for 1 h. ECL developer (Sorfa, Zhejiang, China) was evenly dropped on PVDF membranes, developed and saved. The gray level of the spots was analyzed with Image Lab software. β-actin was used as an internal reference.
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5

Curcumin Analog C1 Regulates Renal Fibrosis

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Streptozotocin (STZ), mannitol, and d-glucose were purchased from Sigma-Aldrich (St. Louis, MO). The curcumin analog C1, trehalose, rapamycin, and bafilomycin A1 were purchased from MedChemExpress (Monmouth Junction, NJ, USA). Antibodies against fibronectin and collagen I were obtained from Abcam (Cambridge, UK). Antibodies against TXNIP, p-p70S6K, p70S6K, TFEB, LC3B, p62, α-smooth muscle actin (α-SMA), E-cadherin, Histone H3, and β-actin were obtained from Proteintech (Chicago, IL). Biochemical parameter reagent kits for urine and plasma were purchased from BioSino Bio-technology and Science Inc. (Beijing, China). TXNIP shRNA plasmid was obtained from Santa Cruz Biotechnology (Dallas, TX, USA). FuGENE® HD transfection reagent and reverse transcription system were obtained from Promega (Madison, WI, USA). TRIzol reagent was obtained from Invitrogen (Carlsbad, CA, USA). SYBR Premix Ex Taq™ II was purchased from Takara (Shiga, Japan).
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6

Western Blot Protein Analysis Protocol

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Radioimmunoprecipitation assay buffer was used for preparing whole cell lysates. Protein was separated by sodium dodecyl‐sulfate polyacrylamide gel electrophoresis and transferred to polyvinylidene fluoride membranes (Millipore). In addition, 1% bovine serum albumin (BSA) was added to block the membranes. Then, the membranes were washed three times with TBS‐0.1% Tween 20 (TBST). The washed membranes were incubated with primary antibodies at 4°C overnight. The following primary antibodies were used: anti‐GAPDH (1:30,000, Cat: 60004‐1‐Ig; Proteintech), Collagen‐I (1:1000, Cat: 14695‐1‐AP; Immunoway), Collagen‐III (1:500, Cat: 22734‐1‐AP; Proteintech), α‐smooth muscle actin (α‐SMA) (1:3000, Cat: 14395‐1‐AP; Proteintech), anti‐Actin (1:5000, Cat: BS6007M; Bioworld), anti‐CXCL4 (1:3000; Proteintech), anti‐TGF‐β1 (1:1000, Cat: CPA2154; Cohesion), and anti‐p‐Smad2/3 (1:1000, Cat: BS1838; Bioworld). The membranes were then incubated with the following horseradish peroxidase‐conjugated secondary antibodies: Afterwards, the secondary antibody (1:10,000; Proteintech) was incubated at room temperature for 1 h. Finally, the antigen‐antibody reactions were visualized by chemiluminescence (ECL) kit, and the intensity of protein bands was quantified by using ImageJ software.
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7

Protein Expression Analysis in Left Ventricle

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The left ventricle under the ligation was used to measure the expression of protein. The whole experimental process of the Western blotting was performed as previously described (Verma et al., 2021 (link)). Antibodies used were as following: Tublin (cat. no. 00082687, Proteintech), α-Smooth muscle actin (α-SMA) (cat. no. 14395-I-AP, Proteintech), Collagen Ⅲ (cat.no. 30565S, Cell Signaling Technology), and Collagen Ⅰ (cat.no. NB600-450, Novus). The result was obtained using an ECL detection kit (Millipore, United States).
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8

Kidney Protein Expression Analysis

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Kidney tissue or cells were lysed in lysis buffer containing 2% SDS following centrifugation. The supernatant was separated on SDS‐polyacrylamide gels. Then, proteins were electrophoretically transferred to polyvinylidene fluoride (PVDF) membrane (Millipore) and blocked with 5% non‐fat milk. Proteins were detected with primary antibody against E‐cadherin (610181; BD Transduction Laboratories), Snail (3879; Cell Signaling Technology), Fibronectin (F3648; Sigma‐Aldrich), FoxM1 (ab1807.10; Abcam), collagen I (Col I) (ab34710; Abcam), Wnt1 (ab15251; Abcam), Wnt2b (ab15251; Abcam), Wnt3 (ab172612; Abcam) from Abcam (Cambridge, MA, USA), active β‐catenin (05‐665; Millipore), β‐catenin (51067‐2‐AP; Proteintech), Col I (14695‐1‐AP; Proteintech), α‐smooth muscle actin (α‐SMA) (14395‐1‐lg; Proteintech), GAPDH (60004‐1‐lg, Proteintech) from Proteintech. The bands were visualized by an ECL detection kit (AmerSham Biosciences) and quantitated via densitometric analysis using the Image J software (NIH).
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9

SV40-Immortalized Mouse Renal Mesangial Cells

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Mouse renal MC lines (SV40-MES13) were purchased from Shanghai Cell Bank of Chinese Academy of Science. SKF38393 (DR1 agonist), sodium hydrogen sulfide (NaHS), PPG (a CSE inhibitor), PD98059 (an ERK1/2 inhibitor), streptozocin (STZ) and 7-Azido-4-Methylcoumarin (H2S probe) were purchased from Sigma-Aldrich (Merck KGaA). The primary antibodies for anti-CSE, cyclin D1, PCNA, P21, COL1, α-smooth muscle actin (α-SMA), and MMP9 were from ProteinTech Group, Inc. DR1 antibody was purchased from GeneTex, Inc. The total (t)-ERK1/2 and phosphorylated (p)-ERK1/2 antibodies were obtained from Cell Signaling Technology, Inc. The Cell Counting Kit-8 (CCK-8) kit and the primary antibody for β-actin were obtained from Wuhan Boster Biological Technology, Ltd. The EdU kit was obtained from Guangzhou RiboBio Co., Ltd. The BCA Protein Assay kit and Enhanced Chemiluminescence (ECL) reagent were purchased from Beyotime Institute of Biotechnology.
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10

Liver Tissue Analysis: Histology and Immunostaining

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The LML and RML liver tissues were fixed with 4% formalin and embedded in paraffin. A tissue microarray was constructed from the specimens, which were sectioned and mounted onto slides. Routine hematoxylin-eosin (H–E) staining was performed to observe structural changes. Immunostaining was also performed in the tissue sections, Ki-67 (Proteintech, Wuhan, China) was used as a marker of hepatocyte regeneration, α-smooth muscle actin (α-SMA, Proteintech, Wuhan, China) was used to identify myofibroblasts.17 (link),18 (link) Extracellular collagen fibers were stained with picric acid–sirius red.19 (link) All sections were digitally imaged using a slide scanner (Hamamatsu Electronic, Shizuoka-ken, Japan). Quantitative evaluation of Ki-67 staining was performed. Briefly, the number of Ki-67-positive hepatocytes per 1,000 hepatocytes were counted in six randomly selected visual fields (200×).
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