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4 protocols using isopropyl β d thiogalactopyranoside

1

Clickable Glycoconjugate Synthesis Protocol

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Bacto-tryptone and yeast extract were obtained from Biokar Diagnostics (FR). LB medium was purchased from Sigma-Aldrich (FR). Ampicillin was purchased from Eurobio (FR). Glycerol and isopropyl β-D-thiogalactopyranoside (IPTG) were purchased from Euromedex (FR).
Glycidyl propargyl ether was obtained from Sigma-Aldrich (Saint-Quentin-Fallavier, FR).
Glacial acetic acid, Trizma® and Hexafluoroisopropanol (HFIP) were obtained from Sigma-Aldrich (FR). Deionized water (18 MΩ-cm) was obtained by using a Millipore Milli-Q Biocel A10 purification unit. Cuprisorb was purchased from Seachem. Ethanol (96.0%, EtOH), mEthanol (98.5%, MeOH) and acetonitrile (99.9%, ACN) were obtained from VWR international. NaCl (99%) was purchased from Alfa Aesar (FR). Azide monosaccharides (β-Dgalactopyranosyl azide, Gal-N 3 ; and β-D-glucopyranosyl azide (Glu-N 3 ) were obtained from Carbosynth (UK). Ammonium Acetate and Ammonium pyrrolidinedithiocarbamate, APDC, were purchased from Fisher Scientific (FR). RCA 120 and RCA 120 -Fluorescein were purchased from Eurobio (FR). Human serum from human male AB plasma, USA origin, sterile-filtered, was used as received from Sigma-Aldrich (FR). N,N,N′,N′′,N′′-pentamethyldiethylenetriamine (PMDETA) was purchased from Sigma-Aldrich (FR). CuSO 4 •5H 2 O was obtained from VWR (FR). Sodium ascorbate was obtained from Fisher Scientific (FR).
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2

Recombinant Histone Protein Expression

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Human HIRIP3, H2A, H2A.Z and H2B cDNAs were PCR-amplified and sub-cloned either in a home-made bi-cistronic pET 28b or pGEX-5X1 vectors, which are under the control of T7 promoter [22 (link)]. PCR-directed mutagenesis was used to generate all the described mutations or deletions. Constructs were introduced into competent BL21-CodonPlus-RIL bacteria (Stratagene, San Diego, CA, USA) using standard heat-shock transformation procedure [23 (link)]. Transformed cells were grown in Luria–Bertani broth at 37 °C, with appropriate antibiotics, till an absorbance of 0.5 at 600 nm. Expression was induced by adding a final concentration of 1 mM isopropyl-β-d-thiogalactopyranoside (Euromedex, Souffelweyersheim, France), which activates expression of genes under control of T7 promoter. After induction, cells were further grown for 2 h at 25 °C. Cell pellets were collected by low-speed centrifugation (10 min at 5000 rpm) and stored at 80 °C.
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3

Recombinant Protein Expression in E. coli

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LB medium was purchased from Sigma-Aldrich (FR). Bacto-tryptone, and yeast extract were purchased from Biokar Diagnostics (FR). Ampicillin was obtained from Eurobio (FR). Glycerol and isopropyl β-D-thiogalactopyranoside (IPTG) were purchased from Euromedex (FR).
Complete mini EDTA-free protease inhibitors were purchased from Roche Diagnostics (D).
Bis(trifluoromethane)sulfonamide lithium salt was purchased from TCI Europe (BEL). Sodium
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4

Reagents for Bacterial Culture Experiments

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Materials. LB medium was purchased from Sigma-Aldrich (Saint-Quentin-Fallavier, FR). Bacto-tryptone, and yeast extract were purchased from Biokar Diagnostics (Allone, FR). Ampicillin was obtained from Eurobio (Courtaboeuf, FR). Glycerol and isopropyl β-D-thiogalactopyranoside (IPTG) were purchased from Euromedex (Souffelweyersheim, FR). Complete mini EDTA-free protease inhibitors were purchased from Roche Diagnostics (Mannheim, D). Hydrogen peroxide and formic acid were purchased from Sigma-Aldrich (St. Louis, MO, USA). Glacial acetic acid was obtained from Fisher Scientific (USA). Deionized water (18 MΩ•cm) was obtained by passing in-house deionized water through a Millipore Milli-Q Biocel A10 purification unit.
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