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7 protocols using ecltm western blotting detection reagent

1

Molecular Investigations in Neuroscience

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Agarose, PIPES, Potassium hydroxide, Tween® 20, 2-mercaptoethanol, Trypsin, MPH, ATX and VPA were purchased from Sigma (St. Louis, MO, USA). ECLTM Western blotting detection reagents were obtained from Amersham Life Science (Arlington Heights, IL, USA). Trizol and SuperScriptTM II Reverse Transcriptase were purchased from Invitrogen (Carlsbad, CA, USA). DNase Ι was purchased from Roche (Mannheim, Germany). Protein G Agarose was obtained from Millipore Corporation (Billerica, MA, USA). Taq polymerase and dNTP were obtained from Takara (Shiga, Japan). Protease inhibitor cocktail was obtained from Calbiochem (La Jolla, CA, USA). Chelex 100 was obtained from BioRad (Hercules, CA, USA). Antibodies were purchased from the following companies: anti-β-actin from Sigma (St. Louis, MO, USA), Histone H3, Acetyl-Histone H3 and HDAC1 antibody from Cell signaling (Boston, MA, USA), DAT, NET and peroxidase-conjugated secondary antibody from Santa Cruz biotechnology (Dallas, TX, USA).
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2

Triclosan Cytotoxicity Signaling Pathway

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Triclosan was obtained from Sigma (St. Louis, MO, USA) while Dimethyl sulfoxide (DMSO), Dulbecco’s modified Eagle’s medium/F12 (DMEM/F12), B-27 supplement and FGF were purchased from Invitrogen (Carlsbad, CA, USA). EGF was purchased from Sigma-Aldrich Co (St. Louis, MO, USA). Penicillin/streptomycin, 0.25% trypsin-EDTA, Tween® 20, and ECLTM Western blotting detection reagents were obtained from Amersham Life Science (Arlington Heights, IL, USA).
Antibodies were purchased from the following companies: anti-β-actin from Sigma (St. Louis, MO, USA); caspase3, cleaved caspase 3, ERK, phosphor-ERK, JNK, phosphor-JNK, PI3K, phosphor-PI3K, p38, phosphor-p38, Akt and phosphor-Akt from cell signaling (Boston, MA, USA); Bax from BD PharmingenTM (BD biosciences, USA); Bcl-2 and cytochrome C from Santa Cruz (CA, USA).
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3

Isolation and Detection of Stx2A and Tir in E. coli O157:H7

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Supernatant components: overnight E. coli O157:H7 cultures were subcultured at 1:1,000 in LB broth for 14 h at 37°C under shaking at 200 rpm, when bacteria were in stationary phase. Bacterial cultures were centrifuged at 5,000 × g at room temperature for 5 min, and the supernatant was then filtered through 0.22 μm filter (Millipore, Bedford, MA, USA). Trichloroacetic acid was added to a final concentration of 10% to the supernatant and incubated overnight at 4°C to precipitate proteins.
Whole bacteria: overnight E. coli O157:H7 cultures were sub-cultured at 1:1,000 in LB broth for 14 h at 37°C under shaking at 200 rpm, when bacterial culture were used for protein extraction.
Protein extracts were separated by 10% SDS-PAGE, transferred to nitrocellulose membranes and assayed with antibodies specific to Stx2A (Toxin Technology Inc., Sarasota, FL, USA) and Tir (a generous gift from Dr. John Leong, Tufts University). Blotted membranes were visualized using ECLTM Western blotting detection reagents (Amersham Bioscience, Piscataway, NJ, USA).
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4

Western Blot Analysis of Steroid Enzymes

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For Western blot analysis, samples were immediately frozen with liquid nitrogen and stored at −25°C. The SG (SLG + SMG and PG), Adr, and placenta homogenates (each n = 3) were suspended in 0.25 M sucrose solution (200 μL) and then centrifuged at 900 × g for 10 min at 4°C. After protein concentrations were estimated using the Lowry protein assay (35 (link)), the protein concentration of each sample was adjusted to 1 μg/μL and 20 μg total protein samples were applied. The homogenates were separated by SDS-PAGE and then transferred onto PVDF membranes (ATTO, Tokyo, Japan) for Western blot analysis. After blocking with 3% skim milk at room temperature for 1 h, the PVDF membranes were incubated for 2 h with the primary antibodies (anti-GAPDH, 1:400; anti-CYP11A1, 1:400; anti-StAR, 1:200; anti-steroid sulfatase, 1:200 and anti-CYP11β1, 1:500) at room temperature. After four washes with PBS for 15 min each, the membranes were incubated with secondary goat anti-rabbit IgG (1:2,000) at room temperature for 2 h. After four washes with PBS for 15 min each, the membranes were reacted for 1 min with ECLTM Western blotting detection reagents (Amersham Biosciences, England). The expression level of each protein was determined densitometrically using CS Analyzer, ver. 3.0 (ATTO).
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5

Immunoblotting Analysis of Protein Fractions

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All fractions were analysed by SDS-PAGE and immunoblotting as described in Kebbi-Beghdadi et al. [36 (link)]. The mouse polyclonal anti_Wcw_1706 antibody diluted 1/1000 was incubated overnight at 4 °C in TBS with 0.05% Tween 20 and 5% non-fat dry milk. Mouse monoclonal anti-GST (Sigma-Aldrich, Buchs, Switzerland) and anti-His (Sigma-Aldrich, Buchs, Switzerland) antibodies were diluted respectively 1/1000 or 1/3000 and incubated during 2 h at room temperature in TBS with 0.05% Tween 20 and 0.5% non-fat dry milk. Secondary goat anti-mouse IgG-HRP (BioRad, Cressier, Switzerland) antibody (1/3000 dilution) was applied during 1 h at room temperature. Immunoblots were revealed with ECLTM Western Blotting Detection Reagent (Amersham, GE Healthcare, Glattbrugg, Switzerland) and analysed on ImageQuant LAS4000 mini (Amersham, GE Healthcare, Glattbrugg, Switzerland).
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6

Protein Expression and Apoptosis Analysis

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Cells were harvested and lysed using lysis buffer (Cell Signaling Technology) containing protease inhibitors (Sigma) and phenylmethylsulfonyl fluoride (PMSF) (Sigma Chemical Co., St Louis, MO, USA). Equal amounts of protein were separated by 10% SDS-PAGE and then transferred to Immobilon-P Transfer Membranes (Millipore Corporation, Bedford, MA, USA). The membranes were pre-blotted in 5% skim milk prior to incubation in 1% skim milk containing primary anti-Sp1 (1:500; Millipore Darmstadt, Germany), anti-KLF12 and anti-XIAP (1:1000; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), anti-cleaved-PARP, anti-cleaved-caspase3 (1:1000; Cell Signaling Technology, Inc., Danvers), anti-DDK (1:1000) (OriGene Technologies, Rockville, MD) and anti-β-actin (1:10000; Sigma-Aldrich, St. Louis, MO) antibodies overnight. The membranes were incubated with horseradish peroxidase-conjugated goat anti-rabbit or anti-mouse IgG (Amersham) and visualized using ECLTM Western Blotting Detection Reagent (Amersham). Images were captured by Fuji Medical X-Ray Film (Fuji) and developed by the Fuji system. The Human Apoptosis Array Kit (R&D Systems, Inc., USA) was used based on the manufacturer’s instructions.
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7

Mitochondrial Function and Senescence Assays

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The materials used in this study are as follows: Dulbecco’s modified Eagle medium (DMEM)/F12, Penicillin-Streptomycin (P/S), 0.25% trypsin-EDTA, and 10% Fetal Bovine Serum (FBS) were from Gibco BRL (Grand Island, NY, USA); Tween® 20 and ECLTM Western blotting detection reagent were from Amersham Life Science (Arlington Heights, IL, USA); anti-β Actin was obtained from Sigma (St. Louis, MO, USA); anti-iNOS and senescence detection kit were the product of Abcam (Cambridge, UK); minoxidil was obtained from Sigma; Agilent Seahorse XF Cell Mito Test Kit was from Agilent Technologies (CA, USA); Alexa Fluor® 594 conjugated Escherichia coli (K-12 strain) BioParticles® and Tetramethylrhodamine Methyl Ester (TMRM) were purchased from Thermo Fisher Scientific (MA, USA); MitoSOX™ was from Invitrogen (MA, USA).
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