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Ix81 confocal microscope

Manufactured by Zeiss

The IX81 is a confocal microscope designed for high-resolution imaging of samples. It features a modular design and can be equipped with a variety of optical and detection modules to suit specific research needs. The core function of the IX81 is to provide high-quality, detailed images of specimens through the use of confocal technology.

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3 protocols using ix81 confocal microscope

1

Immunofluorescence Analysis of Bone Remodeling

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Immunofluorescence was mainly performed as described56 (link). Briefly, freshly dissected bones were fixed in 4% paraformaldehyde for 48 h and incubated in 15% DEPC-EDTA (pH 7.8) for decalcification. Then, specimens were embedded in paraffin or OCT and sectioned at 8 μm. Sections were blocked in PBS with 10% horse serum for 1 h and then stained overnight with mouse-anti-Osteocalcin (Santa Cruz, 1:100, sc-376726), rabbit-anti-Ddah1 (SAB, 1:200, #37368), mouse-anti-Ddah1 (Santa Cruz, 1:100, sc-271337), rabbit-anti-Ddah2 (SAB, 1:200, #38934), mouse-anti-TAZ (Abcam, 1:200, ab242313), rabbit-anti-YAP (Abcam, 1:200, ab52771), and eNOS (Santa Curz, 1:200, sc-376751). Goat-anti-mouse FITC (1:1000; Jackson ImmunoResearch, 705-165-147) and donkey-anti-rabbit Alexa Fluor 488 (1:1000; Molecular Probes, A21206) were used as secondary antibodies. DAPI (Cell Signaling Technology, #4083) and DyLight™ 594 Phalloidin (Cell Signaling Technology, #12877) were used for counterstaining. All immunofluorescence experiments were confirmed by at least one independent repeat. An Olympus IX81 confocal microscope or Zeiss LSM-880 confocal microscope was used to image samples.
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2

Preparation and Analysis of Cranial Defect Histology

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Skulls containing the cranial defect window were harvested from the Mcpt5-Cre-YFP mice, and fixed in 4% paraformaldehyde in neutral buffered saline, and processed for decalcified histology on frozen slides. The skull piece with cranial defect window was laid flat and embedded in O.C.T. using standard protocol. The protocol is publicly available on the website of the Center for Musculoskeletal Research, URMC, University of Rochester (https://www.urmc.rochester.edu/MediaLibraries/URMCMedia/musculoskeletal-research/core-services/histology/documents/Preparation_of_Frozen_Specimens.pdf). Cross sections were cut and the frozen slides were stained with Toluidine Blue/Fast Green Stain, protocol available online as well (https://www.urmc.rochester.edu/MediaLibraries/URMCMedia/musculoskeletal-research/core-services/histology/documents/ToluidineBlueStain.pdf). Direct fluorescence and immunofluorescent imaging of the cranial defect window histology was performed with an Olympus IX81 confocal microscope and the bright fields were imaged with a Zeiss axioskop 40 microscope.
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3

Cardiac and Skeletal Muscle Immunostaining

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Immunofluorescence was performed on cryosections of diastole-fixed hearts or on soleus or tibialis anterior muscle and on embryonic cardiomyocytes using standard protocols and the following antibodies: sarcomeric α-actinin (SαA; Sigma), Thymosin β4 (Immundiagnostik), myomesin and cardiac myosin binding protein C (cMyBPC a kind gift of Elisabeth Ehler/Mathias Gautel), cTnT and cTNI, (Abcam); N2B, PEVK, N2A, Tmod1 and Nebulin (kind gifts of Siegfried Labeit). Images were acquired using an Olympus IX81 confocal microscope, a Zeiss AxioImager with ApoTome or a Leica DM6000 fluorescence microscope with Structured Illumination. Adult heart sections were stained with hematoxylin and eosin, using a standard protocol, or Alexa 594-conjugated wheatgerm agglutinin (Invitrogen), according to the manufacturer's instructions. Nuclear counts, cell area and cell counts were performed on sections which had been anonymised and blinded to genotype, using ImageJ software particle analysis.
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