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6 protocols using dimethyl sulfoxide (dmso)

1

Antimicrobial Potency Determination

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The determination of MIC and MBC values was performed by the microdilution technique. MBC was determined by sub-culturing the samples having a value of lesser or equal to MIC value on the appropriate media namely Mueller Hinton (MH) for bacteria and Sabouraud Chloramphenicol agar (SC) for Candida strains. The highest dilution (lesser concentration) that yielded no single bacterial colony was taken as MBC value. Each extract was diluted in 5% dimethyl sulfoxide (DMSO, Kemika, Zagreb, Croatia) and subjected to serial dilution starting from 150 mg/ml. The 96-well plates (round bottom) were prepared in the same way that each well contains 95 μl of Sabouraud or MH broth, 5 μl of microbial suspension and 100 μl of dilution of the extract (300 mg/ml) to be tested. The negative control well contains 195 μl of enrichment broth without extract and 5 μl of suspension of the microorganism to be tested. After incubation at 37°C for 18 to 24 h, the lowest concentration, at which there was no turbidity, was also regarded as MIC value of the extract. MBC/MFC values are estimated by the concentration of the extract which totally inhibits the growth of bacteria or yeast, and this concentration was subsequently confirmed on MH or SC agar after incubation 24 h at 37°C.
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2

Novel Compounds Inhibition Assay

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Inhibition potency of novel compounds was evaluated for recombinant human AChE (prepared as described earlier25 (link) and kindly donated by Prof Palmer Taylor, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California at San Diego, La Jolla, USA) and BChE isolated from human plasma (kindly donated by late Dr Douglas Cerasoli and Dr David Lenz, USAMRICD, Edgewood, MD). The inhibition mixture contained a 0.1 M phosphate buffer, pH 7.4, enzyme, tested compound, and reagent, 5,5'-dithiobis(2-nitrobenzoic acid) (DTNB, 0.3 mM; Sigma Chemical Co., St. Louis, MO, USA). Enzyme activity was measured upon addition of substrate, acetylthiocholine (ATCh, 0.2 or 0.1 mM; Sigma Chemical Co., St. Louis, MO, USA) by the Ellman method26 (link) at 25 °C and 412 nm, on a Tecan Infinite M200PRO plate reader (Tecan Austria, GmbH, Salzburg, Austria). Due to the low solubility, a stock solution of the tested compounds was prepared in DMSO or methanol (Kemika, Zagreb, Croatia), and a corresponding solvent was in controls as well. The IC50 values were determined from at least three experiments by a nonlinear fit of the compound concentration logarithm values vs. % of enzyme activity using Prism6 software (GraphPad Prism 6 Software, San Diego, USA).
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3

Antioxidant and Cytotoxic Evaluation

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Trolox ® was purchased from the Tokyo chemical industry (Japan). ABTS reagents were purchased from Thermo Fischer Scientific (USA). 3-(4,5-Dimethylthiazol-2-yl)-2,5--diphenyltetrazolium bromide (MTT) reagent was acquired from Carbosynth Limited (UK). Fetal bovine serum (FBS) and non-essential amino acid (NEAA) were purchased from Capricorn Scientific (Germany). DMSO was obtained from Kemika (Croatia). EDTA was purchased from Lonza (Switzerland). The rest of the chemicals and materials were purchased from Sigma-Aldrich (USA).
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4

Assessing Antimicrobial Efficacy of Essential Oils

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The essential oils were obtained from the company Dea Flores d.o.o. (Rijeka, Croatia) and a stock solution of essential oil was prepared using DMSO (dimethylsulfoxide) (Kemika, Zagreb, Croatia) in a concentration of 100 mg/mL. The tested oils were divided into two groups. The first group consists of exotic essential oils: Spikenard (Nardostachys jatamansi), Niaouli (Melaleuca quinquenervia), Hysssop (Hyssopus officinalis), Palmarosa (Cymbopogon martinii) and Ravensara (Ravensara aromatica). The second group consists of essential oils from coastal region of Croatia: Juniper berry (Juniperus communis), Immortelle (Helichrysum italicum), Sage (Salvia officinalis L.), Lavander (Lavandula x hybrida) and Rosemary (Rosmarinus officinalis). The antibacterial activity of bioactive components of the essential oils α-pinene, β-pinene, γ-terpinene and eugenol (Sigma-Aldrich, MO, USA) were also tested. The concentration of the stock suspension was 200 mg/mL.
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5

Extraction and Characterization of Pomegranate Peel Antioxidants

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The extraction was carried out as follows: grounded pomegranate peels (2 g ± 0.0001) were mixed with 20 mL of 30% aqueous ethanol solution containing 1% formic acid (by volume) and extracted in an ultrasonic bath (Elmasonic S 40H, Elma, Singen, Germany) preheated to 50 °C for 30 min. Afterwards, the extracts were filtered through Whatman No. 40 filter paper (Whatman, GE Healthcare Bio-Sciences, Pittsburgh, PA, USA), transferred into volumetric flasks and made up to 25 mL volume with extraction solvent. The extraction process of each sample was done twice and extracts were stored at –20 °C in an inert nitrogen gas atmosphere until further analysis. The obtained pomegranate peel ethanol extracts (PPEs) were afterwards used for the determination of TPC, antioxidant activity and Q-TOF MS profiling. For antitumor and antibacterial assays, the ethanol extracts of pomegranate peels were evaporated to dryness using a speed vacuum (Speed Vac Plus, Savant, Waltham, MA, USA). The dry extracts were then resuspended in dimethyl sulfoxide (DMSO, Kemika, Zagreb, Croatia; 200 mg/mL) to prepare stock solutions of samples.
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6

Astaxanthin Extraction and Analysis

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Astaxanthin (analytical grade) was generously provided from Xiʼan Lyphar Biotech Co., Ltd, China. Potassium nitrate (KNO3) and buffer solutions 2.0-11.0 were from Kemika, Croatia and were analytical grade. Perchloric acid (HClO4), acetone (p.a.) and dimethyl sulfoxide (DMSO, p.a.) were also from Kemika, Croatia. Water was deionised by Millipore Milli-Q system to the resistivity 18 MΩ cm. While using 0.1 mol dm -3 KNO3 as a liquid electrolyte, solution was buffered to the particular pH-value.
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