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4 protocols using hcc4011

1

EGFR-Mutant NSCLC Cell Lines and DNA Extraction

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Cell culture and reagents. Four EGFR-mutant NSCLC cell lines in this study: HCCC827 (exon 19del E746-A750), PC-9 (exon 19del E746-A750), HCC4006 (exon 19del L747-E749), and HCC4011 (L858R). All the lines, except for HCC4011, were purchased from the American Type Culture Collection (Manassas, VA, USA). HCC4011 was kindly provided by Professor Adi F. Gazdar (University of Texas Southwestern Medical Center, Dallas, TX, USA). Five experimentally established EGFR-TKI-resistant cell lines, HCC827-GRS, resistant to Gefitinib by stepwise escalation methods; HCC827-GRH1, resistant to Gefitinib by highconcentration exposure methods; and PC-9-GRS, HCC4006-GRS, and HCC4011-GRS, which had acquired resistance to Gefitinib by stepwise escalation, as reported previously (31) (link). The resistance mechanisms of each drug-resistant cell are shown in Table I. All the cell lines were authenticated by short tandem repeat (STR) DNA analysis (Promega, Madison, WI, USA). All these cells were cultured in Roswell Park Memorial Institute-1640 medium supplemented with 10% fetal bovine serum at 37˚C in a humidified incubator under 5% CO 2 gas. Gefitinib was purchased from InvivoGen (San Diego, CA, USA), and ganetespib was purchased from ChemScene (Monmouth Junction, NJ, USA).
DNA extraction. Genomic DNA was extracted from the cell lines with a DNeasy Blood & Tissue Kit (Qiagen, Hilden, Germany).
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Characterization of EGFR-Mutant Lung Cancer Cells

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PC9, H1975, H1650, Hcc4006, Hcc4011, Hcc2935, Hcc827, H3255, and HEK
293T were acquired from the American Type Culture Collection (ATCC) and were
cultured in the recommended ATCC media. Hcc827R2 and 11–18 cells were
obtained from Dr. Christine Lovly (Vanderbilt University) and cultured in the
recommended media. The identity of the aforementioned cell lines was verified by
autosomal STR (short tandem repeat) profiling done at University of Arizona
Genetics Core (UAGC). Mycoplasma testing was performed every six months using
MycoAlert Detection Kit (Lonza). Osimertinib and erlotinib were purchased from
Selleck Chemicals (Houston, TX). Harmine was purchased from Sigma-Aldrich (St.
Louis, MS). ABT-737 was purchased from ApexBio Technology (Houston, TX)
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Characterization of EGFR-Mutant Lung Cancer Cells

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PC9, H1975, H1650, Hcc4006, Hcc4011, Hcc2935, Hcc827, H3255, and HEK
293T were acquired from the American Type Culture Collection (ATCC) and were
cultured in the recommended ATCC media. Hcc827R2 and 11–18 cells were
obtained from Dr. Christine Lovly (Vanderbilt University) and cultured in the
recommended media. The identity of the aforementioned cell lines was verified by
autosomal STR (short tandem repeat) profiling done at University of Arizona
Genetics Core (UAGC). Mycoplasma testing was performed every six months using
MycoAlert Detection Kit (Lonza). Osimertinib and erlotinib were purchased from
Selleck Chemicals (Houston, TX). Harmine was purchased from Sigma-Aldrich (St.
Louis, MS). ABT-737 was purchased from ApexBio Technology (Houston, TX)
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4

Cell Line Characterization and Inhibitor Analysis

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EGFR mutant NSCLC cell lines PC9 and PC9ER (kindly provided by PD Dr. A. Arcaro, Department of Clinical Research, University of Bern, Bern, Switzerland), HCC4011 (kindly provided by Prof. M.D. A. F. Gazdar and Prof. M.D. J. Minna, University of Texas Southwestern Medical Center, Dallas, TX, USA) and HCC827 (American Type Culture Collection, Manassas, VA, USA) were used in this study. All cell lines were cultured in complete Roswell Park Memorial Institute medium (cRPMI) (Sigma-Aldrich, Buchs, Switzerland), supplemented with 4 mmol/l L-alanyl-L-glutamine (Bioswisstec AG, Schaffhausen, Switzerland) 1% penicillin/streptomycin and 10% fetal bovine serum (Sigma-Aldrich) at 37 °C and 5–10% CO2. Cell lines were authenticated by STR profiling (Microsynth, Balgach, Switzerland) in March 2016.
EGFR inhibitors Gefitinib (Selleckchem, Munich, Germany) and Afatinib (Selleckchem), PI3K-inhibitor LY294002 (Selleckchem), and MEK-inhibitor U0126 (Selleckchem) were used at concentrations indicated in the text.
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