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Micromass q tof micro synapt high definition mass spectrometer

Manufactured by Waters Corporation
Sourced in United States, United Kingdom

The Micromass Q-TOF micro Synapt high definition mass spectrometer is a laboratory instrument designed for high-resolution mass spectrometry. It utilizes a quadrupole time-of-flight (Q-TOF) architecture to provide accurate mass measurements and detailed structural information about complex molecular samples.

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6 protocols using micromass q tof micro synapt high definition mass spectrometer

1

Anhydrous Organic Synthesis Procedures

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Starting materials, reagents, and solvents were purchased from commercial suppliers and used without further purification, unless otherwise stated. Anhydrous tetrahedrofuran (THF) and CH2Cl2 were obtained by distillation over sodium wire or CaH2, respectively. All non-aqueous reactions were run under a nitrogen atmosphere with exclusion of moisture from reagents, and all reaction vessels were oven-dried. The progress of reactions was monitored by TLC on SiO2. Spots were visualized by their quenching of the fluorescence of an indicator admixed to the SiO2 layer, or by dipping into phosphomolybdic acid ethanol solution followed by heating. SiO2 for flash chromatography was of 200–300 mesh particle size, and an EtOAc/PE mixture or gradient was used unless stated otherwise. 1H NMR spectra were recorded at a spectrometer frequency of 400 MHz, 13C NMR spectra at 101 MHz. Chemical shifts are reported in δ (ppm) using the δ 0 signal of tetramethylsilane (TMS) as internal standard. High resolution mass spectra were performed using a Bruker ESI-TOF high-resolution mass spectrometer and Waters Micromass Q-TOF micro Synapt high definition mass spectrometer.
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2

Chiral NMR and X-ray Analysis Protocol

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1H NMR (400 MHz), 13C NMR (100 MHz) and 19F NMR (376 MHz) spectra were recorded on Brucker Asend 400 spectrometers. HRMS was performed on Waters Micromass Q-TOF micro Synapt High Definition Mass Spectrometer. HPLC analysis using a chiral stationary phase was performed on Shimadzu or Dalian Elite (UV230+ UV/Vis Detector and P230P High Pressure Pump). CHIRALCEL OD-H or CHIRALPAK IC column was purchased from Daicel Chemical Industries, Ltd. Single-crystal X-ray diffraction data were recorded on Bruker-AXS SMART APEX II single-crystal X-ray diffractometer. See Supplementary Figs 1–62 for the NMR spectra and HPLC chromatograms, Supplementary Table 1 for the optimization of reaction, Supplementary Discussion for the mechanism studies and computational details and Supplementary Methods for the characterization data of compounds not listed in this part.
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3

High-Accuracy Mass Spectrometry Measurements

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Accurate mass and MS/MS measurements were obtained using a detector with a dual electrospray ionization (ESI) probe and a Micromass Q-TOF micro Synapt High-Definition Mass Spectrometer (Waters, Milford, USA). The mass spectra were acquired in positive ionization modes (ESI+), and the optimal conditions of analysis were set as follows: the source temperature 110°C; the temperature and flow of the desolvation gas 350°C and 600 L/h, respectively; the capillary voltage 2.5 kV for the negative mode; the sampling cone voltage 30 V; the capillary voltage 3.0 kV for the positive mode; extraction cone voltage 45 V; cone gas flow 50 L/h; and collision energy 6.0 eV. All analyses were performed using the LockSpray interface to ensure accuracy and reproducibility. The Q-TOF Premier sample collection was 0.1 s with a 0.02 s scan interval delay, and the first resolving quadrupole was performed in the wide-pass mode (100–1,500 Da). Leucine encephalin amide acetate (200 pg/µL) was used as the lock mass ([M+H]+ = 555.2931, [M−H] = 553.2775) with a flow rate of 20 µL/min.
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4

High-Resolution Mass Spectrometry Protocol

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High-definition mass spectrometry was performed on Micromass Q-TOF micro Synapt High Definition Mass Spectrometer (Synapt HDMS, Waters, Manchester, UK) equipped with electrospray ionization (ESI) in both positive and negative ion modes. The optimal conditions of analysis were as follows: (i) for ESI+: source temperature, 110 °C; capillary voltage, 3 kV; cone voltage, 30 V; extraction cone voltage, 5.0 V; desolvation temperature, 350 °C; cone gas flow, 50 L h−1; desolvation gas flow, 800 L h−1; (ii) for ESI: source temperature, 110 °C; capillary voltage, 2.5 kV; cone voltage, 30 V; extraction cone voltage, 5.0 V; desolvation temperature, 350 °C; cone gas flow, 50 L h−1; desolvation gas flow, 800 L h−1. Data were acquired using an external reference (LockSpray) consisting of a 1 ng L−1 solution of leucine enkephalin infused at a flow rate of 5 L min−1via a LockSpray interface, which generated a reference ion for positive ([M + H]+ = 556.2771) and negative ([M − H] = 554.2615) ion modes to ensure accurate MS analysis.
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5

Metabolomic Profiling Using UPLC-Q-TOF/MS

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Data were acquired using a UPLC-Q-TOF/MS system (Waters Corporation). UPLC analysis was performed in a Waters Acquity UPLC system (Waters Corporation). MS was performed on a Waters Micro mass Q/TOF micro Synapt High Definition Mass Spectrometer. Detailed parameters of the instrument are presented in the Supplementary Materials and Methods (Data S1).
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6

Optimized UPLC-QTOF-MS Analysis

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The liquid chromatograph used was the Waters ACQUITY UPLC system (Waters Corporation, Milford, MA, USA). Supernatant (5 µl) was injected into ACQUITY UPLC BEH C18 columns (2.1 mm × 100 mm; 1.7 µm; Waters Corporation). The column temperature was set at 45°C and the flow rate was 0.3 ml min-1. The gradient system consisted of mobile phase A (0.1% formic acid in water) and mobile phase B (0.1% formic acid in acetonitrile) as follows: 0–8.5 min, 1–25% B; 8.5-11 min, 25–50% B; 11–13 min, 50–90% B; 13–15 min, 90–99% B; 15–17 min, 99% B; 17–18.5 min, 99–1% B; 18.5-20 min, 1% B (9 (link)).
Mass spectrometry was performed on a Waters Micromass QTOF Micro Synapt high definition mass spectrometer (Waters Corporation). Electrospray ionization (ESI) was used in positive mode. Ion source parameters were as follows: Capillary voltage, 3.0 kV; cone voltage, 30 V; nebulizer pressure, 350 psi; nitrogen gas temperature, 325°C; cone gas flow, 50 l/h; desolvation gas flow, 600 l/h; source temperature, 120°C; desolvation temperature, 350°C; 0.1 sec (interval 0.02 sec) collected once spectrum data and scanned at mass range of m/z 50–1,100.
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