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6 protocols using ls174t

1

CRC Cell Lines and Tissue Collection Protocol

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Human CRC cell lines Lovo, SW620, HT29, SW480, HCT116, LS174T and human embryonal kidney 293 cells were purchased from Shanghai Cell Bank of Type Culture Collection. The cell lines were freshly authenticated in last year. The cell lines were cultured in DMEM medium (GIBCO, Gaithersburg, MD, USA) supplemented with 10% fetal bovine serum (HyClone, Logan, USA) in 5% CO2 at 37°C. Images of CRC cells were taken by Olympus inverted microscope and were outputted by CellSens Dimension software. Paired tissues from primary CRC tissues and adjacent normal mucosa were collected from 100 patients who underwent CRC resection without prior radiotherapy and chemotherapy in Nanfang Hospital in 2008. These samples were snap-frozen in liquid nitrogen immediately after resection, and then stored at −8°C until needed. Four-to-six-week-old male athymic BALB/c-nu/nu mice were purchased from the Central Laboratory of Animal Science of Southern Medical University (Guangzhou, China), and maintained in a specific Pathogen Free environment. All protocols for animal studies were reviewed and approved by the Institutional Animal Care and Use Committee of Southern Medical University.
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2

Establishment and Characterization of CRC Cell Lines

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Human CRC cell lines LOVO, SW620, SW480, HCT116, HT-29, LS174T and human embryonal kidney 293 cells were purchased from Shanghai Cell Bank of Type Culture Collection. The cell lines were freshly authenticated in last year. The cell lines were cultured in DMEM medium (GIBCO, Gaithersburg, MD, USA) supplemented with 10% fetal bovine serum (HyClone, Logan, UT, USA) in 5% CO2 at 37 °C. Images of CRC cells were taken by Olympus inverted microscope and were outputted by CellSens Dimension software (Olympus, Shinjuku, Japan). Paired fresh CRC tissues were collected from 30 patients who underwent CRC resection without prior radiotherapy and chemotherapy in Nanfang Hospital in 2010. These samples were snap-frozen in liquid nitrogen immediately after resection, and then stored at −80 °C until needed. Four- to 6-week-old male athymic BALB/c-nu/nu mice were purchased from the Central Laboratory of Animal Science of Southern Medical University (Guangzhou, China), and maintained in a specific pathogen free environment. All protocols for animal studies were reviewed and approved by the Institutional Animal Care and Use Committee of Southern Medical University.
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Culturing Immortalized Ovarian and Colorectal Cancer Cells

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The immortalized human ovarian surface epithelial cells T29 and their transformed counterparts T29Kt1 (with the introduction of KRASV12 into the immortalized cells) were reported previously28 (link) and were cultured in medium consisting of 1:1 MCDB105 medium and M199 medium (Sigma-Aldrich Co.) with 10% fetal bovine serum (HyClone) in the presence of 1% penicillin and streptomycin (HyClone). HCT-116 (p53+/+) and HCT-116 (p53−/−) were kindly provided by Dr Chuangui Wang (East China Normal University, Shanghai, China) and were maintained in DMEM with the same supplements. The culture medium of other cells used is listed in Supplementary Table 2. A549, H441, H358, H1299, H1975, PC9, H661, H522, HCT-15, LoVo, SW480, SW620, DLD-1, HT29, CaCo2, HCT-8, CCD-18Co, CCD841CoN, Panc-1, CFPAC-1 and BxPC-3 were obtained from the American Type Culture Collection (Manassas, VA, USA); Calu-1, Calu-3, WI-38, MRC-5, T84, LS174T, SW1116 and AsPC-1 were obtained from the Shanghai Cell Bank of the Chinese Academy of Sciences (Shanghai, China). KRAS status identification by sequencing and limited genotyping in cancer cells was shown in Supplementary Table 2. Most of these cells were grown at 37 °C under a humidified 95:5 (%; v/v) mixture of air and CO2. SW480 and SW620 cells were grown without CO2. All of the cell lines were authenticated by short tandem repeat analysis.
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4

CRC Cell Lines and miR-190 Characterization

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CRC cell lines, including SW480, SW620, HT-29, and LS174T, were purchased from the Shanghai Cell Bank. HCT116 and 293T cell lines were a kind gift from Dr. Liu Yuwu (Cancer Research Institute of Central South University, Hunan, China). Hsa-miR-190 (000489), U6snRNA (001973), DPC4 h (00929647), and GAPDH Hs (99999905) were synthesized by the ABI company. MiR-190 mimics, inhibitors, negative control (N.C.), and inhibitor N.C. controls were synthesized by the Shanghai Gamma Pharmaceutical Technology Co. The dual luciferase reporter gene, psiCHECK-2™ vector-3'UTR, and psiCHECK-2™ vector-3'UTRmut containing mutation sites were synthesized by the Shanghai Gamma Pharmaceutical Technology (Shanghai, China). Lipofectamine 2000 transfection reagent was purchased from Invitrogen (USA).
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5

Comprehensive Cell Line Panel for Cancer Research

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Calu‐6, SW1573, SW480, T84, SK‐LU‐1, DLD‐1, HCT8, NCI‐H2122, NCI‐H1299, and NCI‐H460 cells were purchased from American Type Culture Collection (ATCC, Manassas, VA, USA). LoVo, NCI‐H358, LS174T, and Calu‐1 cells were purchased from Cell Bank of Shanghai Institutes for Biological Sciences, Chinese Academy of Science (Shanghai, China). A549, HCC2998, and NCI‐H23 were kindly provided by National Institute of Biological Sciences (Beijing, China). Calu‐6, LS174T, LoVo, SW1573, T84, and SK‐LU‐1 cells were maintained in Dulbecco’s modified Eagle’s medium (DMEM; Gibco, Gaithersburg, MD, USA). A549, DLD‐1, HCT8, SW480, HCC2998, NCI‐H2122, NCI‐H23, NCI‐H1299, NCI‐H460, and NCI‐H358 cells were maintained in RPMI‐1640 (Gibco). Calu‐1 cells were maintained in McCoy’s 5A medium (Gibco). All growth media were supplemented with 10% FBS (Thermo Scientific, Waltham, MA, USA), 100 units·mL−1 penicillin (Gibco), and 0.1 mg·mL−1 streptomycin (Gibco). Cell lines were reinstated from frozen stocks and passaged no more than thirty times.
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6

Culturing CRC Cell Lines

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Human CRC cell lines HCT116, LS174T, LOVO, DLD-1, SW620, SW480, HCT-8, HCT-8, HT-29 and human intestinal mucosal epithelial cells NCM460 were purchased from the Shanghai cell bank of the Chinese academy of sciences. All the cells were cultured in RPMI 1640(Gibco) medium, containing 10% fetal bovine serum (FBS, Gibco). All cells were kept at 37°C in a humidified incubator containing 5% CO2.
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