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5 protocols using anti cd36

1

Multiparameter Flow Cytometry of Mouse Blood

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Flow cytometry was performed on mouse blood as previously described (63 (link)). Briefly, to obtain single-cell suspensions, spleen samples were ground between sterile frosted glass slides in 7 ml of red blood cell lysis buffer (0.15 mM NH4Cl, 10 mM KHCO3, 0.1 mM disodium ethylenediaminetetraacetic acid, pH 7.2) and then filtered through sterile nylon mesh. Whole blood, obtained by cardiac puncture, was treated with red blood cell lysis buffer twice. Cell pellets were washed and resuspended in phosphate-buffered saline containing 2 mM ethylenediaminetetraacetic acid and 0.5% bovine serum albumin. Fluorophore-conjugated antibodies with specificity to mouse cell antigens were as follows: anti-CD11b (M1/70) (BD Biosciences Cat# 550993, RRID:AB_394002), anti-CD11c (HL3) (BD Biosciences Cat# 561022, RRID:AB_2033997), anti-SiglecF (E50-2440) (BD Biosciences Cat# 552125, RRID:AB_394340), anti-Ly6G (1A8) (BD Biosciences Cat# 561236, RRID:AB_10611860), and anti-CD36 (JC63.1) (Cayman Chemical Cat# 10009870, RRID:AB_10342682). Live/dead fixable dead cell stains (ThermoFisher) were used to exclude dead cells. CD11b+/c+ cells were analyzed for CD36 expression. Paraformaldehyde-fixed cells were acquired using a Becton Dickinson (BD) LSR Fortessa flow cytometer (BD Biosciences, University of Alberta Flow Cytometry core) and analyzed with FlowJo (version 10) software (RRID:SCR_008520).
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2

Investigating Fibrosis Markers in Mice

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Bleomycin, DNase I, paraformaldehyde, mouse IgG, and mouse serum were purchased from Sigma-Aldrich (St. Louis, MO, USA), and simvastatin, obtained from the Cayman Chemical Co. (Ann Arbor, MI, USA), was used as indicated.). Dispase was obtained from Corning Incorporated (Corning, NY, USA). Antibodies for western blotting were as follows: anti-CD36, anti-MMR (Cayman Chemical Co), anti-α- SMA, anti-fibronectin (Abcam, Cambrige, MA, USA), anti-type 1 collagen α2 (Santa Cruz Biotechnology, Santa Cruz, CA, USA), anti-α-SMA (Abcam), and anti-β-actin (Sigma-Aldrich).
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Antibody-based Analysis of Lipid Metabolism

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The following antibodies were used: guinea pig and mouse monoclonal against Adipose Differentiation Related Protein (ADRP; Research Diagnostics, Concord, MA, USA), monoclonal anti-α-tubulin (BD Transduction Laboratories, Franklin Lakes, NJ, USA), CS-35 anti-lipoarabinomannan (LAM) monoclonal, rabbit anti-whole ML (kindly provided by Dr Patrick J. Brennan, Colorado State University, Fort Collins, CO, USA; NIH/NIAID contract 1Al25469), anti-SR-A1 (mouse monoclonal, SC-166184), SREBP-1 (rabbit polyclonal, SC-8984), LDL-R (goat polyclonal, SC-11824), anti-HMGCR (SC-33827, rabbit polyclonal IgG) and anti-GADPH (mouse monoclonal) from Santa Cruz Biotechnology (Santa Cruz, CA, USA), anti-CD36 (rabbit polyclonal; Cayman Chemical, Ann Arbor, MI, USA) and anti-CD36 (rat monoclonal, Ab80080), SREBP-2 (rabbit polyclonal, ab30682) from Abcam (Cambridge, MA, USA), fluorescent-labelled (Alexa Fluor 488, 555, and 633) goat anti-rabbit and anti-mouse (Molecular Probes, Eugene, OR, USA), donkey anti-guinea pig fluorescent-dye-Cy2 conjugated, and, lastly, control IgG (Jackson ImmunoResearch Laboratories, West Grove, PA, USA).
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Zymosan-Induced Macrophage Activation

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Zymosan was purchased from Sigma-Aldrich (St. Louis, MO, USA). The antibodies used for Western blotting were as follows: anti-phospho STAT6 (Tyr-641), anti-STAT6, anti-PPARγ, anti-CD36, anti-MMR, and anti-arginase-1 (Arg1) from Cayman Chemical Co (Ann Arbor, MI, USA), anti-phospho JAK3 (Tyr-980/981), anti-JAK3 (Cell signalling Technology, Danvers, MA), and anti-β-actin from Sigma-Aldrich. Pierce BCA protein assay kit was purchased from Thermo Scientific (Rockford, IL, USA). The gene-specific relative RT-PCR kit was obtained from Invitrogen Life Technologies (Carlsbad, CA, USA). M-MLV reverse transcriptase was from Enzynomics (Seoul, Korea). DNA polymerase Klenow fragment and dNTPs were obtained from Intron Biotechnology (Seoul, Korea).
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Western Blot Analysis of Membrane Proteins

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Proteins were isolated and equal amounts were separated by SDS-PAGE and transferred to nitrocellulose membranes (Sigma). After blocking, membranes were incubated with primary antibodies (anti-SR-BI, BD Biosciences 610882; anti-β-actin, Abcam ab8229; anti-CD36, Cayman 100011) at 4°C over-night. Membranes were then incubated with the appropriate horseradish peroxidase-coupled secondary antibodies followed by detection using the Super Signal chemiluminescence system (Thermo Scientific) and a Chemilmager 4440 (Biozym, Oldendorf, Germany).
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