The largest database of trusted experimental protocols

Z lr amc fluorogenic peptide substrate

Manufactured by R&D Systems
Sourced in United States

Z-LR-AMC is a fluorogenic peptide substrate. It is a synthetic compound composed of a fluorescent dye (AMC) attached to a peptide sequence (Z-LR).

Automatically generated - may contain errors

4 protocols using z lr amc fluorogenic peptide substrate

1

Quantification of Inflammatory Mediators

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse and human IL-1β DuoSets were obtained from R&D Systems (Minneapolis, MN) and ELISA assays performed according to the manufacturer’s protocol. IL-18 capture and detection antibodies were also obtained from R&D Systems. The IL-18 ELISA, although developed in-house, was run similar to R&D Systems IL-33 DuoSet ELISA with regard to timings, diluents, standard curves, and washes. Lavage fluid samples were assayed without dilution. In vitro media supernatants were diluted (1:5 for mouse cells, 1:100 for human cells) for optimizing the fit to the kit’s standard curve. All plates were read at 450 nm and data expressed as pg/ml.
Cathepsin activity for the first WLL fluid was determined by mixing the following assay components in a 96-well plate using PBS as diluent: first WLL fluid (50 μl), 2 μg Z-LR-AMC (fluorogenic Peptide Substrate, R&D systems, Minneapolis, MN) in a total volume of 150 μl. The assays samples were incubated at 37 °C for 1 hour then fluorescence was measured using a plate reader at 380 nm excitation and 460 nm emission.
+ Open protocol
+ Expand
2

Pulmonary Inflammation and Damage Evaluation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell damage and inflammatory markers were assessed within LLF of the mice. Cell damage was determined by release of lactate dehydrogenase (LDH; CytoTox 96 cytotoxicity assay, Promega; Madison, WI, USA) and protein concentration (Pierce BCA protein assay, Thermo Fisher Scientific; Waltham, MA, USA) according to manufacturer’s instructions. Cytokines were quantitated by using a customized MesoScale Discovery U-PLEX assay platform (IFNγ, IL-1β, TNFα, IL-33, IL-6, IL-10, IL-13; Meso Scale Diagnostics LLC; Rockville, MD, USA) according to manufacturer’s instructions. Phagolysosomal membrane permeability (LMP) analysis was determined by total cathepsin (CTS; Z-LR-AMC fluorogenic peptide substrate, R&D Systems; Minneapolis, MN, USA) and cathepsin B (cathepsin B inhibitor II—Calbiochem, Millipore Sigma; Burlington, MA, USA) release within the LLF and IL-1β release (mouse IL-1β DuoSet ELISA, R&D Systems) within the supernatants of isolated ex vivo AM.
+ Open protocol
+ Expand
3

Assessment of Cell Damage and Inflammation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell damage and inflammatory markers were assessed within LLF of the mice. Cell damage was determined by release of lactate dehydrogenase (LDH; CytoTox 96 cytotoxicity assay, Promega; Madison, WI, USA) and protein concentration (Pierce BCA protein assay, Thermo Fisher Scientific; Waltham, MA, USA) according to manufacturer’s instructions. Cytokines were assessed by using a customized MesoScale Discovery U-PLEX assay platform (IFNγ, IL-1β, TNFα, IL-33, IL-6, IL-10, IL-13; Meso Scale Diagnostics LLC; Rockville, MD, USA) according to manufacturer’s instructions. Phagolysosomal membrane permeability (LMP) analysis was determined by total cathepsin (CTS; Z-LR-AMC fluorogenic peptide substrate, R&D Systems; Minneapolis, MN, USA) and cathepsin B (cathepsin B inhibitor II - Calbiochem, Millipore Sigma; Burlington, MA, USA) release within the LLF and IL-1β release (mouse IL-1β DuoSet ELISA, R&D Systems) within the supernatants of isolated ex vivo AM.
+ Open protocol
+ Expand
4

Lung Inflammation Markers Assessment

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell damage and inflammatory markers were assessed within LLF of mice. Cell damage was determined by release of LDH (CytoTox 96 cytotoxicity assay, Promega) and protein concentration (Pierce BCA protein assay, Thermo Fisher Scientific; Waltham, MA, USA) according to manufacturer’s instructions. Inflammatory cytokines were measured by using a customized MesoScale Discovery U-PLEX assay platform (IFNγ, IL-1β, TNFα, IL-33, IL-6, IL-10, IL-13; Meso Scale Diagnostics LLC; Rockville, MD, USA) according to manufacturer’s instructions. LMP was determined by total cathepsin (Z-LR-AMC fluorogenic peptide substrate, R&D Systems) and cathepsin B release (cathepsin B inhibitor II - Calbiochem, Millipore Sigma; Burlington, MA, USA) within the LLF and IL-1β release (mouse IL-1β DuoSet ELISA, R&D Systems) within the supernatants of isolated ex vivo AM.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!