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Monobromobimane

Manufactured by Thermo Fisher Scientific
Sourced in United States, Japan

Monobromobimane is a fluorescent reagent used for the detection and quantitation of sulfhydryl groups in biological samples. It reacts with free sulfhydryl groups to form a fluorescent adduct, allowing for the identification and measurement of these moieties in various experimental contexts.

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10 protocols using monobromobimane

1

Quantification of Antioxidants in Leaf Tissue

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For the quantification of the anthocyanin content, approximately 40–70 mg of leaf tissue was homogenized in 1 ml of propanol:HCl:water (18:1:81) and further extracted in a boiling-water bath for 3 min. The mixture was centrifuged at 5000 g for 40 min. The absorbance of the supernatant was measured at 535 and 650 nm, and referred to the fresh weight as described (Laureano-Marín et al., 2016 (link)).
To quantify hydrogen peroxide, 50 mg of leaf tissue was ground in liquid nitrogen with 250 μl of 50 mM phosphate buffer, pH 7.4, vortexed and shaken continuously at room temperature for 30 min. Samples were centrifuged at 4 °C at 12 000 g for 10 min. Fluorescence quantification of H2O2 was performed in the supernatant after incubation with Amplex Red reagent (Thermo Fisher Scientific) and horseradish peroxidase using 560 nm excitation and 590 nm emission filters. Standard calibration curves were obtained with known H2O2 concentrations.
To quantify the total Cys and glutathione contents, thiols were extracted, reduced with NaBH4, and quantified by reverse-phase HPLC after derivatization with monobromobimane (Thermo Fisher Scientific) as described previously (Dominguez-Solis et al., 2001 (link)).
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2

Buffers and Reagents for Protein Studies

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Buffer A consists of 20 mM Tris and 300 mM NaCl, adjusted to pH 7.4 unless otherwise stated.
Buffer B consists of 300 mM NaCl, 2.7 mM KCl, 5.3 mM Na2HPO4 and 1.5 mM KH2PO4, adjusted to pH 8 unless otherwise stated. Both buffers were supplemented with 0.02% DDM (Anatrace, Maumee, OH) when specified.
Buffer C consists of 15 mM Na2HPO4, 150 mM NaNO3 adjusted to pH 7.
Pre-mix buffer consists of 10 mM Na2HPO4, 140 mM NaNO3 adjusted to pH 7 unless otherwise stated.
Quenching buffer consists of 10 mM Na2HPO4, 90 mM TlNO3, 50 mM NaNO3 adjusted to pH 7 unless otherwise stated.
MBS buffer consists of 88 mM NaCl, 1 mM KCl, 2.5 mM NaHCO3, 5 mM HEPES, 0.7 mM CaCl2 and 1 mM MgSO4.
MES buffer consists of 100 mM NaCl, 3 mM KCl, 1 mM CaCl2, 1 mM MgCl2 and 10 mM MES.
CHO labeling buffer consists of 150 mM NaCl, 8.1 mM Na2HPO4, 1.9 mM NaH2PO4, 0.1 mM CaCl2 and 1 mM MgCl2, adjusted to pH 7.4.
CHO conservation buffer consists of 160 mM NaCl, 4.5 mM KCl, 2 mM CaCl2, 1 mM MgCl2, 10 mM HEPES and 8 mM glucose, adjusted to pH 7.4.
Monobromo bimane (ThermoFisher Scientific, Pittsburgh, PA) was dissolved in 100% DMSO at 10 mM and stored at −20° C.
Bimane Bunte salt was dissolved at 50 mM in water and stored at −80° C.
Unless otherwise stated, all chemicals were purchased from Sigma Aldrich (St Louis, MO).
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3

Metabolic Regulation in Cancer Cells

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BPTES (HY-12683), CBR-5884 (HY-100012), SHIN1 (HY-112066), DS18561882 (HY-130251), and sorafenib (HY-10201) were purchased from MedChemExpress. Trolox (S3665), lenvatinib (S1164) were from selleckchem. Crystal violet (V5265), H2DCFDA (D399), MitoSOXTM Red (M36008), monobromobimane (mBBr, M1378), Propidium Iodide (P3566), RNase A (10109169001), (3-(4,5-Dimethylthiazol-2-yl)-2,5-Diphenyltetrazolium Bromide) (MTT, M6494), Hoechst 33342 (H3570), and LipofectamineTM RNAiMAX Transfection Reagent (13778150) were obtained from Thermo Fisher Scientific. H2O2 (216763) was purchased from Sigma-Aldrich. Triton X-100 (0694) was purchased from AMRESCO. Primary antibodies against SHMT2 (sc-390641), PHGDH (sc-100317), and β-actin (sc-47778) were purchased from Santa Cruz Biotechnology. MTHFD2 (98116 S) was acquired from Cell Signaling Technology. Secondary antibodies of the mouse and rabbit were from Cell Signaling Technology and Abcam respectively (7076 S and ab6721). Small interfering RNA (siCTRL and siATF4) oligonucleotides were purchased from Santa Cruz Biotechnology (sc-37007 and sc-35112, respectively).
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4

Cysteine Trisulfide Synthesis and Characterization

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Cysteine trisulfide was generously synthesized and provided by Prof Jon M. Fukuto (Sonoma State University) and was >90% pure by 1H NMR and ESI-MS and the major impurity was cystine [13 (link)]. Cysteine trisulfide stock solutions were made in 10 mM HCl unless otherwise specified and used immediately. 4,4′-dipyridyl disulfide, cystine, dithiothreitol, sodium sulfide (Na2S), sodium hydrosulfide (NaSH), oxidized glutathione and Thapsigargin were obtained from Sigma-Aldrich. Phosphate buffered saline, distilled water and biotinylated glutathione ethyl ester (BioGEE) was obtained from Invitrogen and bond-breaker TCEP solution and monobromobimane was from ThermoFisher.
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5

Algal Thiol Derivatization and Quantification

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The alga (0.2 g of DT) was frozen in liquid nitrogen and homogenized in a mortar with a pestle and extracted by addition of 1.2 ml of 0.1% (w/v) trifluoroacetic acid (TFA)–6.3 mM diethylenetriaminepentaacetic acid (DTPA). The mixture was centrifuged at 12,000 × g for 20 min at 4°C, and the supernatant was recovered and filtered through a 0.45-μm-pore size membrane. Thiol groups were subjected to derivatization by mixing 250 μl of the filtered homogenate with 45 μl of 200 mM HEPES, pH = 8.2–6.3 mM DTPA, and 1 μl of monobromobimane (Invitrogen, Eugene, OR, United States), and the solution was incubated at room temperature in darkness for 30 min. Derivatization process was arrested by addition of 30 μl of methanesulfonic acid (MSA).
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6

Leaf Glutathione Content Measurement

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Leaf samples (approximately 100 mg for each sample) were harvested 0, 6, 12, 24 and 48 h after foliar treatment with CMPA. The extraction and measurement of GSH were performed as previously described [45 (link),46 (link)]. Briefly, the GSH content in the leaf extract was determined via monobromobimane (Invitrogen) labeling of the thiol bases after the reduction of the extracts with dithiothreitol (Nacalai Tesque Co., Ltd., Japan). The labeled products were analyzed via HPLC with a fluorescence detector FP-920 (JASCO) using a TSKgel ODS-120T column (4.6 × 150 mm, Tosoh, Tokyo, Japan). The fluorescence of the thiol-bimane adducts was detected at 478 nm under excitation at 390 nm. The GSH standards were purchased from Nacalai Tesque.
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7

Plant Powder Analysis by Ion Chromatography

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One mg of the plant powder was extracted with 200 µL of 10 mM HCl. The cell debris was removed by centrifugation, and the supernatant was used for the analysis. The extracts were diluted 100 fold with extra pure water and analyzed by ion chromatography as described previously [29 (link)], using an eluent containing 1.9 mM NaHCO3 and 3.2 mM Na2CO3.
Cysteine and GSH contents were determined by monobromobimane (Invitrogen) labeling of thiol bases after reduction of the extracts with dithiothreitol (Nacalai Tesque) as described [13 (link),28 (link),29 (link)]. The labeled products were then separated by HPLC (JASCO, Tokyo, Japan) using the TSKgel ODS-120T column (150 × 4.6 mm, TOSOH) and detected with a fluorescence detector FP-920 (JASCO), monitoring for fluorescence of thiol-bimane adducts at 478 nm under excitation at 390 nm. GSH and Cys standards were purchased from Nacalai Tesque (Kyoto, Japan).
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8

Detecting Cysteine Polysulfides by Mass Spectrometry

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Cysteine polysulfide (CysSSH) was detected using monobromobimane (Invitrogen), as described previously (12 (link)). monobromobimane efficiently and specifically reacts with CysSSH to form a CysS-S-bimane adduct. HeLa cells were grown on a 10-cm dish, washed with phosphate-buffered saline and directly treated with 200 μl of 5 mM monobromobimane dissolved in methanol. Cells were collected, sonicated and incubated at 37°C for 15 min. Insoluble materials were removed by brief centrifugation at 10 000 × g for 10 min. Supernatants were diluted with distilled water and subjected to mass spectrometry using the MRM method in the positive ion mode. The MRM parameters for bimane adducts were as described previously (12 (link)).
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9

Metabolite Profiling of Plant Tissues

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Plant tissues were harvested and frozen in liquid nitrogen before extraction of metabolites. Plant extraction was performed as described previously (29 (link)). GSL was analyzed by liquid chromatography–mass spectrometry [Acquity UPLC system (Waters) connected to a Q-Tof Premier TOF-MS analyzer (Micromass)], and the amount of each GSL species was determined according to the method described previously (29 (link), 71 (link), 72 (link)). Sulfate content was determined by a capillary electrophoresis–photodiode array detection system according to the manufacturer’s protocol (Agilent Technologies). Cys and GSH contents were determined by monobromobimane (Molecular Probes) labeling of the thiols after reduction of the plant extracts by dithiothreitol. The labeled products were analyzed by high-performance liquid chromatography according to the method described previously (29 (link)).
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10

Chemical Reagent Procurement for Experiments

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Chemicals and buffer components were purchased
from Fischer, except monobromobimane, which was purchased from Molecular
Probes.
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