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11 protocols using gw4064

1

Bile Acid Regulation Protocol

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GCDCA (Purity 97%) was purchased from Shanghai Yuanye Bio-Technology Company (Shanghai, China). It was dissolved in cell medium and stored at 4 °C before used. LDN-193189 and GW4064 were purchased from Selleck Chemicals Company (Houston, TX, USA). Guggulsterone was purchased from MedChemExpress Company (Shanghai, China). LDN-193189, GW4064 and guggulsterone were dissolved in DMSO and stored at −20 °C before used.
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2

Investigating Autophagy and FXR Regulation in Catfish Hepatocytes

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We isolate hepatocytes from yellow catfish liver tissues according to our recent publication [21 (link)]. The isolated cells were seeded onto 25 cm2 plates (1 × 106 cells/mL) and placed in an incubator at 28 °C and 0.5% CO2 (Sanyo, Japan). Two pathway inhibitors and two agonist were used in the in vitro trials. They are rapamycin (RM, autophagy agonist, Selleck, USA), 3-methyladenine (MA, autophagy inhibitor, Selleck, USA), GW4064 (GW, FXR agonist, Selleck, USA) and guggulsterone (GS, FXR inhibitor, Sigma, USA), respectively. Treatment groups were designed as follows: control, 0.5 mM FA (PA, palmitic acid: OA, oleic acid =1:1), 20 nM rapamyicn (RM), 5 mM MA, 20 μM guggulsterone (GS), 1 μM GW4064 (GW), 0.5 mM FA + 20 nM rapamycin (FA + RM), 0.5 mM FA + 5 mM MA, 0.5 mM FA + 1 μM GW4064 (FA + GW) and 0.5 mM FA + 20 μM guggulsterone (FA + GS), respectively. Each treatment had three replicates. Based on our pilot trials, the FA level was set at a concentration that did not adversely affect cell viability. We selected the inhibitors/agonist concentrations based on our other pilot trials and to previous reports [22 (link), 23 (link)]. The cells were collected at 48 h for the analyses described below.
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3

Ferroptosis Pathway Modulators Protocol

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CA (S3742), dehydrocholic acid (DCA, S4562), CDCA (S1843), erastin (S7242), Ferrostatin-1 (Fer-1, S7243), and GW4064 (S2782) were purchased from Selleck Chemicals (Houston, TX, United States). RSL3 (HY-100218A) was purchased from MedChemExpress (Monmouth Junction, NJ, United States). Anti-GPX4 (67763-1-Ig, 1:2500), anti-β-actin (HRP-66009, 1:5000), anti-FXR (25055-1-Ig, 1:1000), anti-GCLC (12601-1-AP, 1:4000), anti-GCLM (14241-1-AP, 1:4000), anti-GSS (67598-1-Ig, 1:4000), and anti-BTB and CNC homology 1 (BACH1, 14018-1-AP, 1:5000) antibodies were purchased from Proteintech (Wuhan, China).
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4

Small Molecule Screening Compounds

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Closantel (HY-17596), CAPE (HY-N024), and AG-490 (HY-12000) were ordered from MedChemExpress. GW4064 (S2782), gossypol acetate (S2303), and eltrombopag olamine (S2229) were ordered from Selleckchem. Verteporfin (B1583-5) was ordered from BioVision.
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5

Profiling FXR and β-Catenin in HCC

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HCC tissues and the paired adjacent non-tumorous tissues were obtained from Zhongshan Hospital of Fudan University. Ethical approval for human subjects was obtained from the Research Ethics Committee of Zhongshan Hospital. And informed consent was obtained from each patient. For immunohistochemistry analysis of FXR and β-Catenin expression in human liver cancer tissue specimens, 8 paired fresh frozen liver tissues and matched normal tissues were used. 19 paired fresh resections were collected for western blot analysis.
The SMMC-7721, HL-7702, BEL-7404, HepG2, Hep3B, Huh7, Sk-hep-1, MHCC-97L and HCCLM3 cell lines were obtained from the Type Culture Collection of Chinese Academy of Sciences (Shanghai, China), and were maintained in Dulbecco's modified Eagle's medium (Gibco) supplemented with 10% fetal bovine serum (Gibco) at 37°C in a humidified incubator containing 5% CO2. FXR agonists (GW4064 and WAY-362450 both were purchased from Selleck Chemicals, Houston TX, USA) treatment was carried out in charcoal stripped fetal bovine serum (Gibco).
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6

Geniposide and tBHQ Regulation of FXR

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Geniposide and tert-butyl hydroquinone (t-BHQ) were purchased from Aladdin (Shanghai, China). GW4064 was obtained from Selleck Chemicals (Houston, TX) and prepared as a 5 mM stock solution in DMSO. Dulbecco's modified Eagle's medium (DMEM) and OPTI-MEM were from Gibco (Grand Island, NY). Fetal bovine sera (FBS) was from Sciencell (Carlsbad, CA). Lipofectamine 2000 was from Invitrogen (Carlsbad, CA). A Dual Luciferase assay kit was purchased from Promega (Madison, WI). Antibodies against FXR and BSEP were obtained from Abcam (Cambridge, MA). The antibodies against Nrf2 and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were purchased from Bioworld Technology (St. Paul, MN). Antibodies to CARM1 and PGC-1α were purchased from proteintech (Chicago, IL). Antibodies to Lamin B, β-actin, PRMT1 and SRC-1 were from Abways (Danvers, MA). Other supplies and reagents are described below.
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7

Modulating FXR-Bile Acid Signaling in Septic Shock

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Septic shock was induced by intraperitoneal injection of LPS (20 mg/kg for 6 h; 30 mg/kg for survival assays). For activation or inhibition of FXR-bile acid signaling, mice were treated with GW4064 (i.p. 5 mg/kg 30 min before LPS challenge), OCA (i.g. 15 mg/kg 1 hr before LPS challenge), DCA-Na (i.p. 50 mg/kg 2 hr after LPS challenge), Ad-flag-FXR virus (i.v. 5 × 1010 cfu/kg/d for 3 days prior to LPS challenge) or cholestyramine resin (i.g. 2.5 g/kg twice per day for 5 days prior to LPS challenge). LPS (E.coli 0111:B4), DCA-Na and cholestyramine resin were from Sigma-Aldrich (St Louis, USA), and obetacholic acid (OCA) and GW4064 were from Selleck Chemicals (Houston, USA).
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8

Exploring FXR Function via Calcium Channel Modulation

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In order to investigate the biological function of FXR in vivo, an L-type calcium channel agonist, Bayk8644 (2 mg/kg, Meilunbio, Dalian, China) was given intraperitoneally at 10 min after reperfusion. Bayk8644 stock solution (1 mmol/L in dimethyl sulfoxide, DMSO) was diluted in 1× phosphate-buffered saline (PBS) with a final DMSO concentration of 4.6%. Similarly, PBS with 4.6% DMSO was given intraperitoneally in sham, wild-type vehicle, and FXR knockout vehicle groups as control. To further explore dose response in primary neurons, a dose range of ionomycin (50 nmol/L, Beyotime Biotechnology, Shanghai, China), GW4064 (0, 1, 1.5, 3, and 6 μmol/L, Selleck, Houston, USA), or Z-guggulsterone (Z-GS, 0, 2.5, 5, and 10 μmol/L, Thermo Scientific, Waltham, MA) was given for 18 h before oxygen and glucose deprivation (OGD).
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9

Dietary Modulation of Cholesterol Metabolism

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0.5% (w/w) CA in Teklad 7001 or Teklad 2019 base diet was from Envigo. 2% (w/w) cholestyramine (Sigma) diet on AIN93G was made by Research Diets. 0.2% (w/v) sodium deoxycholic acid (Sigma) was dissolved in sterile water. Tamoxifen (Sigma) treatment was performed by intraperitoneal (IP) injection or given in chow (Envigo TD.130858) (64 (link)), as indicated in legends. Tamoxifen was dissolved in ethanol/cremaphore at 20 mg/ml, diluted 1:1 in sterile PBS and mice received 1 mg in 100 ul. Tamoxifen chow was provided for 2–4 wks. Labelling was assessed 24 hrs after last injection/removal of diet. Diphtheria toxin (Sigma) was injected retro-orbitally, 500 ng/100 ul sterile PBS/mouse. Two injections were given 48 hrs apart, and mice were analyzed for deletion after 24 hrs. GW4064 (Selleck Chem) was dissolved in DMSO, resuspended in sterile methycellulose and given IP at 100 mg/kg body weight.
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10

Culturing HCC Cell Lines for Experiments

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HCC cell lines Huh7 and SMMC-7721 were purchased from the Cell Bank of the Chinese Academy of Sciences (Chinese Academy of Sciences, Shanghai, China). Huh7 and SMMC-7721 cells were incubated in DMEM and RPMI 1640 (Gibco, Grand Island, NY, USA), respectively, with 10% fetal bovine serum (Gibco) at 37 °C in a humidified incubator containing 5% CO2. Recombinant human TNF-alpha (PeproTech, Rocky Hill, NJ, USA), FXR agonist GW4064 (Selleck Chemicals, USA), MG132 (Beyotime Biotechnology, China) and cycloheximide (CHX, Sigma-Aldrich, USA) were used to treat cells for experiments.
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