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15 protocols using fluorescein isothiocyanate conjugated phalloidin

1

Immunofluorescence Assay for Bacterial Proteins

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Samples were fixed in 3.7% formaldehyde in PBS for 20 min and blocked/permeabilized with 0.1% Triton X-100 and 0.5% bovine serum albumin in PBS for 20 min. Samples were subsequently incubated in primary antibodies (goat anti-E. coli from Abcam; rabbit anti-EspA from Gad Frankel, Imperial College London; mouse anti-Tir from John Leong, Tufts University, USA) for 60 min, washed, and incubated in Alexa Fluor-conjugated secondary antibodies (Invitrogen) for 30 min. Filamentous actin was labeled with fluorescein isothiocyanate-conjugated phalloidin (Sigma). Samples were mounted in Vectashield medium (Vector Laboratories) and analyzed using a fluorescence light microscope (Axiovert 200M; Zeiss).
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2

Angiotensin II-Induced Cardiomyocyte and Fibroblast Morphology

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Cardiomyocytes and cardiac fibroblast were stimulated with 10(−6) mol/L angiotensin (Ang) II for 48 hours. To examine changes in cell morphology and cytoskeleton, cells were fixed in 4%paraformaldehyde, stained with fluorescein isothiocyanate-conjugated Phalloidin (Sigma-Aldrich, St. Louis, MO) for 30 min and mounted in Vectashield with 4′,6-diamidino-2-phenylindole (Vector Laboratories, Peterborough, UK). Cellular hypertrophy was evaluated by measuring cardiomyocytes and cardiac fibroblasts surfaces using a digital image analysis system (Leica QwinV3, Leica Microsystems Ltd, Cambridge, UK). Five random fields (with approximately 10–15 cells per field) from every sample were averaged and expressed as μm2/cell. All experiments were repeated 3 times.
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3

Immunofluorescence of Actin and Nuclei

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Cells were fixed with 4% paraformaldehyde in phosphate-buffered saline and permeabilized with 0.2% Triton X-100 in phosphate-buffered saline. Then cells were washed twice with PBS and blocked with 1% BSA and 10% fetal bovine serum in PBS for 20 min. Fixed cells were incubated with 1:2000 fluorescein isothiocyanate-conjugated phalloidin (Sigma, St. Louis, MO, United States) or antibodies as indicated. Cells were counterstained with 4, 6-diamidino-2-phenylindole (DAPI) (Calbiochem, San Diego, CA, United States) and imaged with Olympus microscope.
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4

Cellular Imaging with Fluorescent Markers

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For the IF studies, cells were fixed with 4% paraformaldehyde in phosphate-buffered saline and permeabilized with 0.2% Triton X-100 in phosphate-buffered saline. Fixed cells were incubated with 1:2000 fluorescein isothiocyanate-conjugated phalloidin (Sigma, St. Louis, MO) or antibodies as indicated. Cells were counterstained with 4, 6-diamidino-2-phenylindole (DAPI) (Calbiochem, San Diego, CA) and imaged with a confocal laser-scanning microscope (Olympus FV1000, Tokyo, Japan).
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5

Cytoskeletal Morphology Evaluation via Phalloidin Staining

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To evaluate any morphological changes induced by the treatments, phalloidin staining was performed for each experimental group. For this purpose, ARPE-19 cells were seeded at 2 × 105 cells/well density in 6-well plates. Cells were washed two times with Phosphate-Buffered Saline (PBS), were fixed with 4% Paraformaldehyde (PFA) for 10 min, and were incubated with 3% Bovine Serum Albumin (BSA) with 0.1% Triton for 30 min for non-specific binding sites block. Fluorescein Isothiocyanate conjugated Phalloidin (Sigma Aldrich, Saint Louis, MO, USA) (1:250 in PBS1X), incubated for 40 min at Room Temperature (RT), was used to label cellular cytoskeleton and Bisbenzimide to counterstain cellular nuclei. Images were acquired with Floid Cell Imaging Station (Thermo Fisher Scientific Inc., Monza, Italy).
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6

Western Blot and Immunofluorescence Analysis

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Proteins were separated on SDS–PAGE and transferred to nitrocellulose membrane (Bio-Rad). The membrane was blocked with 5 % non-fat milk and incubated with the corresponding mouse anti-FOS, Met, E-cadherin, α-catenin, β-catenin, N-cadherin, fibronectin, vimentin (BD Biosciences, 1:1000 dilution), α-tubulin (Santa Cruz Biotechnology, Santa Cruz, CA, 1:1000 dilution), snail and GAPDH (Cell signaling Technology, Beverly, MA, 1:500 dilution) monoclonal antibodies. The proteins were detected with enhanced chemiluminescence reagents.
For the IF studies, cells were fixed with 4 % paraformaldehyde in phosphate-buffered saline and permeabilized with 0.2 % Triton X-100 in phosphate-buffered saline. Fixed cells were incubated with 1:2000 fluorescein isothiocyanate–conjugated phalloidin (Sigma, St. Louis, MO) or antibodies as indicated. Cells were counterstained with 4, 6-diamidino-2-phenylindole (DAPI) (Calbiochem, San Diego, CA) and imaged with a confocal laser-scanning microscope (Olympus FV1000, Tokyo, Japan).
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7

Visualizing Osteoclast Actin Rings

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For detection of the actin ring, mature osteoclasts were transduced with SELENOW-overexpressing retrovirus, fixed with 3.7% formaldehyde, permeabilized with 0.1% Triton X-100 in PBS, and stained with fluorescein isothiocyanate-conjugated phalloidin (Sigma-Aldrich). Fluorescence images were acquired with a BX51 microscope (Olympus, Tokyo, Japan). TRAP + MNCs with a full actin ring were counted to assess osteoclast survival. To measure caspase activity in mature osteoclasts, osteoclast precursors were differentiated into osteoclasts in the presence of M-CSF and RANKL for 3 days. Cells were washed twice with PBS and treated with 0.1% trypsin-EDTA for 5 min to remove the monocytes. After washing with PBS, osteoclasts were incubated with enzyme-free cell dissociation solution (Millipore) for 30 min. Purified osteoclasts were re-plated at 1 × 106 cells on 10-cm culture dishes and then incubated for 24 or 36 h with M-CSF and RANKL. Caspase activity was assayed with a fluorometric kit (R&D Systems, Minneapolis, MN, USA). Briefly, the cells were washed with ice-cold PBS and lysed in the cell lysis buffer provided with the kit. The caspase-3 [DEVE-p-nitroaniline (pNA)] or caspase-9 (LEHD-pNA) substrate was added to the lysates in a 96-well plate followed by incubation for 1 h. The release of pNA was measured at 405 nm on a microplate reader.
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8

Fluorescent Imaging of C2C12 Cell Morphometry

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To evaluate the effects of HX on the morphometric parameters of C2C12 cells, 1 × 104 cells per well were seeded in GM on coverslips. The plates were cultivated under both experimental conditions up to day-14 post-MD. The cells were fixed with 4% PFA for 10 min at RT then were washed in PBS twice for 10 min. the cells were permeabilized in 0.1% tween (Roth, Germany) for 5 min. After washing with PBS, the cells were incubated with 0.5 mg/mL fluorescein isothiocyanate conjugated phalloidin (Sigma-Aldrich, Germany diluted 1:30 in PBS) in dark for 30 min. Cell nuclei were counterstained with DAPI for 5 min. The cells were mounted with DABCO Mowiol and then were photographed under fluorescent microscope. Morphometric analysis of the myotubes indicating MD was conducted on five randomly chosen microscopic fields per experimental group (n = 6). The data parameters including number, length and size of the myotubes were measured using ImageJ software.
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9

Immunofluorescent Localization of Tight Junction Proteins

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Following exposure to 1 µmol L−1 BK, NT or SP for 60 minutes, the cells were quickly washed with ice-cold phosphate-buffered saline (PBS), fixed with 4% paraformaldehyde (Electron Microscopy Sciences, Fisher Scientific, Waltham, MA, USA) for 5 minutes and blocked for 30 minutes (10% goat serum and 0.2% Triton-X100 in PBS). Then, the BMEC monolayers were incubated with mouse-anti human claudin-5 (dilution 1:100, ThermoFisher; RRID: AB_2533200) or mouse-anti human occludin (dilution 1:100, ThermoFisher; AB_2533101) antibodies overnight at 4°C. Primary antibodies were detected using a goat-anti mouse IgG Alexa Fluor® 555-conjugated secondary anti-body (ThermoFisher). In experiments involving F-actin, freshly fixed BMEC monolayers were stained with 0.1 mg mL−1 fluorescein isothiocyanate-conjugated phalloidin (Sigma-Aldrich) for 30 minutes. All images were acquired using a DMi8 inverted epifluorescence microscope (Leica Microsystems, Wetzlar, Germany). Images were analysed using IMAGEJ (NIH, Bethesda, MD, USA).
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10

Evaluation of Outer Hair Cells in Guinea Pigs

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After guinea pigs were anesthetized using an intraperitoneal injection of a mixture of medetomidine (0.3 mg/0.3 mL/kg), midazolam (4 mg/0.8 nL/kg), butorphanol (5 mg/mL/kg), and saline (2.9 mL/kg), the head was promptly decapitated and the temporal bone was removed. The cochlea was extracted from the temporal bone and fixed with 4% PFA for 24 h at room temperature. The organ of Corti was excised, permeated with 0.3% Triton X-100 for 10 min, and stained with fluorescein isothiocyanate-conjugated phalloidin (1 µg/mL PBS; Sigma) for 1 h. Samples were washed with PBS and observed using fluorescence microscopy. The outer hair cells between 45% and 70% of the distance from the apex to the basal rotation (second rotation of the cochlea) were observed. The reason for observing the outer hair cells in this region is that the outer cochlea forms the strongest obstacle to rotation because of the octave band noise centered at 4 kHz (Viberg & Canlon, 2004 (link)).
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