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5 protocols using rat anti cd8

1

Immunohistochemical Analysis of Vaginal Immune Cells

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The vagina was embedded in OCT and snap frozen in liquid nitrogen
pre-cooled isopentane. Frozen vaginal tissue blocks were cut into sections with
the thickness of 5 μm, stored in −70°C until use.
Cryostat sections were fixed in acetone for 5 min, rehydrated in PBS, and
incubated overnight with primary antibodies including rabbit anti-CD3 (1:100
dilution, AbCam), rat anti-CD8 (1:200 dilution, Biolegend) and hamster
anti-CD11c (1:150 dilution, Biolegend). The primary antibodies were washed out 3
times by PBS followed by the addition of HRP conjugated secondary antibodies
(Vector Lab) including horse anti-rabbit IgG, goat anti-rat IgG and goat
anti-hamster IgG. The secondary antibodies were incubated in room temperature
for 30 minutes followed by DAB (kit from Vector Lab) development and hematoxylin
(BBC Biochemical) counter staining.
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2

Immunohistochemical Analysis of Vaginal Immune Cells

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The vagina was embedded in OCT and snap frozen in liquid nitrogen
pre-cooled isopentane. Frozen vaginal tissue blocks were cut into sections with
the thickness of 5 μm, stored in −70°C until use.
Cryostat sections were fixed in acetone for 5 min, rehydrated in PBS, and
incubated overnight with primary antibodies including rabbit anti-CD3 (1:100
dilution, AbCam), rat anti-CD8 (1:200 dilution, Biolegend) and hamster
anti-CD11c (1:150 dilution, Biolegend). The primary antibodies were washed out 3
times by PBS followed by the addition of HRP conjugated secondary antibodies
(Vector Lab) including horse anti-rabbit IgG, goat anti-rat IgG and goat
anti-hamster IgG. The secondary antibodies were incubated in room temperature
for 30 minutes followed by DAB (kit from Vector Lab) development and hematoxylin
(BBC Biochemical) counter staining.
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3

Immunofluorescence Analysis of Skin Infiltrates

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Inflammatory skin infiltrates and markers were evaluated on frozen skin sections as previously described (4 (link)). Acetone-fixed frozen skin sections were blocked in Dulbecco’s PBS + 5% goat serum (catalog S-1000-20, Vector Laboratories) for 1 hour at room temperature. The fixed skin sections were incubated with rat anti-CD8 (catalog 100702, 1:100, BioLegend) and rat anti–I-A/I-E (catalog 107602, 1:100, BioLegend) overnight at 4°C, followed by incubation with Alexa Fluor 594–labeled secondary antibody (catalog A-11007, 1:500, Thermo Fisher Scientific). The endogenous biotin was blocked using a streptavidin/biotin blocking kit (catalog SP-2002, Vector Laboratories). Antifade Mountant with DAPI (catalog H-1200-10, Vector Laboratories) was used as the mounting medium. Immunofluorescence images were captured on a Zeiss LSM 700 laser scanning confocal microscope.
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4

Immunohistochemical analysis of mouse pancreas

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Livers and pancreata removed from sacrificed mice were fixed in 4% PFA for 5 h at 4 °C, dehydrated in 30% sucrose overnight at 4 °C, and embedded in O.C.T mounting medium (VWR Chemicals) before freezing at −70 °C. Five micrometre cryostat (Leica) sections were air-dried, fixed in acetone for 6 min, air-dried, and stored at −20 °C. Immunolabelling was performed on sections pre-blocked with 1% BSA by incubating with rabbit anti glucagon (Millipore, cat no. AB932, 1:20) guinea pig anti-insulin (DAKO, cat no. A0564, 1:150), rabbit anti C-peptide (Cell Signalling, cat no. 4593S, 1:50), Rat anti-CD3 (Biolegend, cat no. 100202, 1:100), Rat anti-CD8 (Biolegend, cat no. 100702, 1:50) for 1 h at 4 °C. Incubation with relevant Alexa Fluor® secondary antibodies (Invitrogen, 1:500) and DAPI (4′,6-diamidino-2-phenylindole) (Invitrogen) followed. Sections were then mounted in Prolong Diamond Antifade solution (Thermo Fisher Scientific) and visualised using a Zeiss LSM 700 confocal microscope (Zeiss, Germany). Images were captured and processed using Zen software (Zeiss).
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5

Immunohistochemistry Protocol for Tissue Staining

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As previously described(Yilmaz et al., 2012 (link)), tissues were fixed in 10% formalin, paraffin embedded and sectioned. Antigen retrieval was performed with Borg Decloaker RTU solution (Biocare Medical) in a pressurized Decloaking Chamber (Biocare Medical) for 3 minutes. Antibodies used: rat anti-BrdU (1:2000, Abcam 6326), mouse monoclonal β-catenin (1:100, BD Biosciences 610154), rabbit monoclonal OLFM4 (1:10,000, gift from CST, clone PP7), rat anti-CD3 (1:200, eBioscience, clone 145–2C11), rat anti-CD4, (1:200, Biolegend, clone H129.19), rat anti-CD8 (1:200, Biolegend, clone 53–6.7), anti-Ki67 (1:200, Thermo Fisher, MA5–14520). Biotin-conjugated secondary donkey anti-rabbit or anti-rat antibodies were used from Jackson ImmunoResearch. The Vectastain Elite ABC immunoperoxidase detection kit (Vector Labs) followed by Dako Liquid DAB+ Substrate (Dako) was used for visualization. All antibody incubations involving tissue or sorted cells were performed with Common Antibody Diluent (Cell Signaling).
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