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18 protocols using propidium iodide staining

1

Tualang Honey Protects HCEP Cells from H2O2-Induced Cytotoxicity

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HCEP cells were cultured with 0.004, 0.04, 0.4, and 3.33% (v/v) Tualang honey in supplemented KSFM for 48 h. Treated cells then were exposed to 50 µM H2O2 for 24 h. The number of dead cells in treated groups after H2O2 exposure was measured using propidium iodide staining (BD Bioscience Franklin Lakes, NJ, USA) and quantified using a flow cytometer (FACS Canto, BD Bioscience Franklin Lakes, NJ, USA). Untreated HCEP cells served as the negative control. Ascorbic acid, a potent anti-H2O2 agent used as a positive control and 5-hydroxymethyl-2-furancarboxaldehyde were both purchased from Sigma, St Louis, MO, USA.
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2

Cell Cycle Analysis by Flow Cytometry

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Cell cycle analysis was carried out using flow cytometry with propidium iodide staining (BD Biosciences, Franklin Lakes, NJ, USA). After transfection for 48 hours, the cells were harvested and then fixed with 70% ethanol at 4°C overnight. Next, after washing with PBS three times, the cells were resuspended in 500 μL propidium iodide and incubated at room temperature for 30 min. A total of 10,000 events were counted for each sample and analyzed with a FACScaliber Flow Cytometer (BD Biosciences).
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3

Cell Cycle and Death Analysis

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Propidium iodide staining was used for cell cycle analysis according to the manufacturer’s protocol (BD Biosciences). Cell death in tissue sections was quantified after staining with TUNEL/Hoechst (Roche).
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4

Multiparametric Flow Cytometry of B Cell Subpopulations

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Fluorophore-conjugated Abs directed against the following surface markers
were used: B220 (RA3–6B2), CD23 (B3B4), CD69 (H1.2F3), CD93 (AA4.1) and
CD86 (GL-1) from eBioscience (San Diego, CA, USA); CD19 (1D3) from BD Pharmingen
(San Diego, CA, USA); IgM (goat polyclonal F(ab’)2, μ
chain specific) from Jackson ImmunoReseach (West Grove, PA, USA). B cell
populations from the spleen and bone marrow (BM) were stained for 30 minutes on
ice with anti-CD23-FITC, anti-IgM-PE-Cy7, anti-CD93-allophycocyanin (APC),
anti-B220-APC-eFlour 780, and B cell subpopulations from each mouse strain were
investigated on an LSR II flow cytometer (BD Biosciences, San Jose, CA, USA) by
Allman’s protocol (23 (link)). Dead cells
were identified and excluded by propidium iodide staining (BD Pharmingen). Flow
cytometry data were analyzed with FlowJo software version 10 (Tree Star,
Ashland, OR, USA).
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5

Cell Cycle Analysis of HUVEC-Cs

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HUVEC-Cs were treated with PDA (10 μM), trypsinized and fixed with 70% ethanol. The cell cycle was analyzed using flow cytometry after propidium iodide staining (BD Biosciences).
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6

Cell Cycle Analysis by Flow Cytometry

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Cobalt complex 2-treated cells were harvested and analysed by flow cytometry using propidium iodide staining (BD Biosciences, San Jose, CA, USA) according to the manufacturer instructions. Cell population in different phase of cell cycle were quantitatively counted by a flow cytometer (BD FACSAria III, San Jose, CA, USA). Data acquisition and analysis were performed with CellQuest (BD Biosciences, San Jose, CA, USA) from triple independent experiments.
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7

Characterizing Pyroptosis via Caspase-1 and PI

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Active Caspase-1 and PI fluorescence in vivo and in vitro are necessary for pyroptosis characterization. We measured the active caspase-1 level in cell suspensions with Caspase-1 Detection Kit (ImmunoChemistry Technologies, USA) using flow cytometry according to the manufacturer's instructions. And membrane pores induced by pyroptosis were marked by propidium iodide staining (BD, USA).
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8

Cell Viability Evaluation by Flow Cytometry

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Cell survival was evaluated by flow cytometry (BD ACCURI C6, BD Biosciences, USA) with propidium iodide staining (BD Biosciences). At the end of the hypoxia period, cells were digested with 0.25% trypsin (Wisent) and centrifuged at 1000 rpm for 5 min. After removal of the supernatant, cells were washed twice with PBS, then incubated with PI diluted in PBS for 10 min in the dark. Analysis was performed according to the relative fluorescence intensity of PI. Viable cells have a low fluorescence intensity and high forward scatter (FS).
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9

Macrophage Polarization Modulation by Cyanotoxins

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RAW264.7 cells were left alone or cultured with IL-4 (5 ng/ml) for 48 h. Some cells were also treated with 0.1 μM MC-LR or MC-RR. The cells were harvested, washed, and resuspended in 0.5% bovine serum albumin (BSA)-phosphate-buffered saline (PBS). Next, the cells were preincubated with mouse Fc block (eBioscience, San Diego, California, United States) for 15 min and subsequently stained with an Alexa Fluor 488-conjugated anti-CD11b Ab (eBioscience) and an allophycocyanin (APC)-conjugated anti-CD206 Ab (eBioscience) for 30 min at 4°C in the dark. Flow cytometric analyses were performed using a FACSCalibur flow cytometer (BD Biosciences, San Jose, CA, United States) and FlowJo software. Apoptotic cells were analyzed by flow cytometry using annexin V-fluorescein isothiocyanate (FITC) and propidium iodide (PI) staining (BD Biosciences). Some cells were fixed in 70% ethanol for overnight, stained with 10 μg/ml PI, and analyzed for cell cycle distribution by flow cytometry.
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10

Cell Cycle Analysis by PI Staining

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Propidium iodide (PI) staining (BD, Franklin Lakes, NJ) was used to quantify cell cycle analysis. SRA01/04 cells were fixed with 75% ethanol for overnight at -20° C before stained with PI. After washing with HBSS for three times, the stained cells were analyzed by a FACS Calibur Flow cytometer (BD, NJ, USA).
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