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Cyclone plus system

Manufactured by PerkinElmer
Sourced in United States

The Cyclone Plus system is a benchtop cyclonic sample preparation device designed for the efficient extraction of analytes from solid samples. The system utilizes high-velocity air flow to homogenize and extract samples, preparing them for further analysis.

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14 protocols using cyclone plus system

1

Radiolabeling of Fe3O4@Al(OH)3 Nanoparticles

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To evaluate the time course of radiolabeling, 45 µL of Fe3O4@Al(OH)3 NPs containing 60 µg of Fe were incubated with 5–30 MBq [18F]NaF (5–30 µL) while shaking. Two, five, and 10 min after labeling, 2 µL samples were taken and blotted on instant thin layer chromatography (iTLC) papers impregnated with silica gel (iTLC-SG papers; Varian, Diegem, Belgium). The papers were developed in an elution chamber using NaCl 0.9% as the mobile phase. The read-out was performed using a 2480 Wizard2 Automatic Gamma Counter (20 s protocol; PerkinElmer, Waltham, MA, USA) after splitting the papers into two equal halves representing the unbound and bound radiotracer. In addition, autoradiography was performed using phosphor screens (Perkin Elmer) in standard film cassettes. The screens were removed from the cassettes after a five-minute exposure and were scanned immediately at 300 dpi resolution using a Cyclone Plus System (Perkin Elmer). Images were analyzed using the manufactures’ Optiquant software (version 5; Perkin Elmer).
For further in vitro and in vivo experiment, NPs are labeled with [18F]NaF for ten minutes in Milli-Q water. Afterward, they are centrifuged for 20 min at 4000 rpm and resuspended in the media of choice for further application.
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2

Biodistribution of Radiolabeled Peptides

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Wild-type mice were anesthetized (2.5% isoflurane in O2 at 1 L/min flow rate) and intravenously injected with [18F]AlF-NOTA-DV1-k-(DV3) and [68Ga]Ga-DOTA-DV1-k-(DV3) (3.5–4 MBq). After 75 min, mice were sacrificed by decapitation. Organs of interest were quickly excised and snap frozen in 2-methylbutane (−40 °C). Next, 20 μm sections of liver, kidney and spleen were obtained using a cryotome (Shandon cryotome FSE; Thermo Fisher Scientific, Waltham, MA, USA) and these were mounted on adhesive microscope slides (Superfrost Plus; Thermo Fisher Scientific, Thermo Fisher Scientific, Waltham, MA, USA) after which they were exposed to a phosphor storage screen (super-resolution screen; Perkin Elmer, Waltham, MA, USA) overnight. Screens were read in a Cyclone Plus system (Perkin Elmer, Waltham, MA, USA), and images were analyzed using OptiQuant software (Perkin Elmer, Waltham, MA, USA). The remaining excised tissue was further sectioned in 20 μm slices and stored at −20 °C.
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3

Optimizing Terbium-161 Radiolabeling Conditions

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Optimization of radiolabeling conditions: [161Tb]TbCl3 (0.2 MBq, 10 μL, 50 mM HCl) was added to 90 μL of a solution with different quantities of the ligand (DTPA, DOTA, DOTA-GA or NETA, 0.1-1.0 nmol) in sodium acetate buffer (0.1M, pH 4.7, chelex treated) and reacted in a glass vial for 60 min at 25 or 40°C (n = 3). The radiochemical yield of each reaction mixture was determined by instant thin-layer liquid chromatography (iTLC-SG, Varian, Diegem, Belgium). iTLC-SG papers were developed in an elution chamber using acetonitrile/water (75/25). The distribution of activity on the iTLC chromatograms was quantified using phosphor storage autoradiography [super-resolution screen, Perkin Elmer, Waltham, USA processed in a Cyclone Plus system (Perkin Elmer) and analyzed using Optiquant software (Perkin Elmer)].
Radiolabeling HSA-constructs: Purified HSA-constructs were labeled using 10 μM of the HSA-conjugate (90 μL) with [161Tb]TbCl3 (0.2 MBq, 10 μL, 50 mM HCl) at 40°C for 60 min (n = 3). Radiochemical yields were determined by iTLC-SG, eluted with sodium citrate buffer (0.1 M, pH 5.8). Radiolabeled HSA-constructs were additionally analyzed by radio-SEC using the method described above.
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4

Quantifying Tumor and Muscle Radiolabeled Peptide

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Melanoma tumor
mice and E. coli muscle infected mice
were anesthetized with isoflurane 2.5% in O2 at a flow
rate of 1 L/min, 3.5–5.5 MBq radiolabeled peptide was injected
i.v. via a tail vein, and after 30 or 60 min (n =
3–4/time point), mice were euthanized by decapitation. Tumor
and muscle tissues were dissected, rinsed with saline to remove blood,
and snap frozen in 2-methylbutane (cooled to −40 °C).
Next, 50 μm sections were obtained using a cryotome (Shandon
cryotome FSE; Thermo Fisher, Waltham, MA) and mounted on adhesive
microscope slides (Superfrost Plus; Thermo Fisher Scientific). The
slides were exposed to phosphor storage screens (super-resolution
screen; PerkinElmer, USA) for at least 12 h, screens were read in
a Cyclone Plus system (PerkinElmer), and images were analyzed using
Optiquant software (PerkinElmer).
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5

In vitro Transcription-Translation Assay for VP Protein

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VP protein in vitro coupled transcription/translation assays were carried out with a TNT T7 Quick coupled transcription/translation system (catalog no. L1170; Promega) according to the manufacturer's protocol. In brief, 1 μg template plasmid DNA, 0.5 μl PCR enhancer buffer, and 1 μl [35S]methionine (catalog no. NEG709A; PerkinElmer) were added to 20 μl master mix and incubated at 30°C for 90 min, followed by adding 20 μl 1× sodium dodecyl sulfate (SDS) gel-loading buffer and heating at 75°C for 5 min. Samples were loaded onto a 15% gradient SDS-polyacrylamide gel electrophoresis (PAGE) gel and run for 1.5 h. The gel was fixed and dried at 85°C for 1 h. The signals were detected with a Cyclone Plus system (PerkinElmer) and analyzed using OptiQuant software.
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6

Autoradiographic Binding Assay for HSP Inhibitors

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Frozen slices were air-dried and preincubated in PBS for 10 min at room temperature. After drying, the slices were incubated with 74 kBq/mL of the tracer in 200-250 µL PBS + 0.3% BSA per section for 10 min at room temperature. To assess binding specificity, slices were incubated with 74 kBq/mL of tracer (200-250 µL PBS + 0.3% BSA) in the presence of DMSO (10%) or 100 µM of either authentic NMS-E973, PU-H71, Ganetespib, PU-WS13 or HSP70 inhibitor Pifithrin-µ in DMSO (10%). Incubation solutions were removed, after which the tumour slices were washed twice for 5 min in PBS + 0.3% BSA at 4 °C with a final washing step encompassing a quick dip in water at 4 °C, after which the slices were dried. Autoradiograms were obtained by exposing the slices to a phosphor storage screen (super-resolution screen; Perkin Elmer, Waltham, MA) overnight. The screens were read using a Cyclone Plus system (Perkin Elmer) and the images were analysed using Optiquant software (Perkin Elmer). Results are expressed as digital light units per square mm (DLU/mm2). Percentage block vs control was calculated as (DLU/mm2 in the presence of 100 µM blocker) / (DLU/mm2 tracer only) on 3-4 tissue sections from the same experiment.
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7

Quantification of SSTR2 Expression

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U2OS cells, either transfected with SSTR2 [20 (link)] or wild-type were seeded in 24 well plates (105 cells per well) and grown until confluent. The cells were kept alive or killed with 50 µL EtOH (70%) and incubated with [111In]In-DOTA-TATE (10 nM, 50 MBq/nmol) in culturing medium for 30 min. A blocking experiment was included by co-incubation with DOTA-TATE (10 µM). After gentle washing with PBS, autoradiography of the whole plate was performed using a super-resolution phosphor screen and a Cyclone® Plus system (Perkin Elmer, Waltham, MA, USA). Then, the cells were detached with NaOH (1 M, 1 mL) and collected in tubes for γ-counting (1480 γ-counter Perkin Elmer, Waltham, MA, USA). Each experiment was performed in n = 6.
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8

RNA Detection and Analysis Protocol

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Ten micrograms total RNAs prepared from transfected cells was incubated with a 32P-labeled probe at 51°C overnight, followed by treatment with RNase A and RNase T1 for 1 h and then precipitation with 2 volumes of 100% ethanol for at least 30 min at −40°C. The RNAs were collected by centrifuging for 15 min at 4°C, and they were then separated by running on a 6% gradient PAGE gel for 2 h. The signals were detected with the Cyclone Plus system (PerkinElmer) and analyzed using OptiQuant software.
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9

Thin-Layer Chromatography Radioactive Quantification

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Instant thin-layer liquid chromatography papers (iTLC-SG, Varian, Diegem, Belgium) were developed in an elution chamber using 0.5 M sodium citrate pH 5.5. The strips were analyzed using phosphor storage screens (super-resolution screen, Perkin Elmer, Waltham, MA, USA). Screens were read in a Cyclone Plus system (Perkin Elmer, Waltham, MA, USA), and images were analyzed using Optiquant software (Perkin Elmer, Waltham, MA, USA) or by an automated gamma counter which contained a 3-inch NaI(Tl) well crystal linked to a multichannel analyzer (2480 Wizard2, Perkin Elmer, Waltham, MA, USA). For quantification, counts were corrected for background, counter dead time and physical decay during counting.
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10

Binding Assay for Tau and Amyloid Imaging Tracers

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Air-dried, frozen, 10-µm thick slices of the visual cortex of an patient with AD (68-year old female with Braak stage V-VI) were incubated for 60 minutes with [18F]T808 or [18F]T807 (0.74 MBq/500 µL per section) and subsequently washed with mixtures of phosphate-buffered saline (PBS) and ethanol as described elsewhere.11 (link) In the case of [11C]PiB, slices were incubated with 0.37 MBq/500 µL per section for 10 minutes. To assess specificity of binding, slices were incubated with tracer in the presence of 1 µmol/L of authentic T808, T807, astemizole, lansoprazole, THK-5105, BF-158, BF-170, TAU1-8, or PiB. After drying, the slices were exposed to a phosphor storage screen (super-resolution screen; Perkin Elmer, Waltham, Massachusetts). Screens were read in a Cyclone Plus system (Perkin Elmer) and analyzed using Optiquant software (Perkin Elmer). Results are expressed as digital light units per square mm (DLU/mm2). Adjacent AD slices were immunostained with anti-tau (T6402) and anti-Aβ antibodies (6F/3D), as described earlier, to correlate with [18F]T808, [18F]T807, or [11C]PiB binding. Slices of the P301L-transgenic mice and their wild-type controls were analyzed in similar manner using [18F]T808 (0.74 MBq/500 µL per section) and 1 µmol/L of cold T808.
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