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Stim1

Manufactured by Merck Group
Sourced in Germany, United States

STIM1 is a laboratory equipment product manufactured by Merck Group. It is a high-performance device designed for the detection and analysis of intracellular calcium signaling. The core function of STIM1 is to monitor and measure changes in calcium levels within cells, which is a critical process in various cellular and biological functions.

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6 protocols using stim1

1

RNA Isolation and Real-time RT-PCR Analysis

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Total RNA was isolated using TRIzol reagent protocol (Invitrogen) and a treatment with DNase I amplification Grade (Sigma-Aldrich, St. Louis, MO, USA) was done according to the manufacturer’s instruction. Quantification was performed by spectrophotometry (ND-1000, Nanodrop Technologies, Wilmington, DE, USA). The sequence of primers used for RT-PCR is shown in Table 1. Quantification was done using the QuantiTect SYBR Green RT-PCR kit (Qiagen GmbH, Hilden, Germany) for 50 µg of RNA and 1 µl of primer. The mRNA expression was analyzed in the Light Cycler thermal cycler system (Roche Diagnostics, Indianapolis, IN, USA) and the relative expression of the target genes was determined using the 2−ΔΔCt method.

Sequences of the primers used for real-time RT-PCR.

GeneForward primer (5′-3′)Reverse primer (5′-3′)
FGF23TGGCCATGTAGACGGAACACGGCCCCTATTATCACTACGGAG
RunX2CGGGAATGATGAGAACTACTCGCGGTCAGAGAACAAACTAGGT
OsterixGTACGGCAAGGCTTCGCATCTGATCAAGTGGTCGCTTCGGGTAAAG
STIM1CAGTACTACAACATCAAGAAGCTTTTTATTTTCTCAGCCCCC
TbpACTCCTGCCACACCAGCCGGTCAAGTTTACAGCCAAGATTCA

All primers were purchased from Eurofins Genomics Germany GmbH, Ebersberg, Germany except STIM 1 which was purchased from Sigma-Aldrich, St. Louis, MO, USA.

FGF23, fibroblast growth factor 23; RunX2, Runt-related transcription factor 2; STIM1, Stromal interaction molecule 1; Tbp, TATA sequence binding protein.

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2

Western Blot Protein Detection Assay

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Protein was harvested and western blot performed as described (21 (link),22 (link)) using the following antibodies: RRM1 (Cell Signaling #8637, RRID:AB_11217623), STIM1 (Sigma-Aldrich S6197, RRID:AB_1079007), ATF4 (Cell Signaling #11815, RRID:AB_2616025), HA (Roche #3F10, RRID:AB_2314622), GAPDH (Origene #TA802519, RRID:AB_2626378), HSC70 (Santa Cruz #sc-7298, RRID:AB_627761), anti-rabbit IgG (Jackson ImmunoResearch Labs #211-032-171, RRID:AB_2339149) and anti-mouse IgG (Jackson ImmunoResearch Labs #115-035-174, RRID:AB_2338512). Further details are in Supplemental Material and Methods.
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3

Protein Expression Analysis by Western Blot

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Western blots were performed using 4% to 20% tris-glycine gels (BioRad). Fifteen micrograms of protein was loaded. Primary antibodies against β-Actin (Santa Cruz), STIM1 (Sigma-Aldrich), Cx43 (Sigma), Phospho-Cx43 pSer368 (Milipore), Phospho-CAMKII (phosphorylated Ca2+/calmodulin-dependent protein kinase II) at pThr286 (Thermo), and Nav1.5 (Alomone) were used. Secondary antibodies were species-specific horseradish peroxidase-conjugated antibodies (Thermo Scientific).
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4

Western Blot Analysis of Lung Cell Signaling

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Cells or rat lung tissue were lysed in the RIPA lysis buffer (KeyGEN Biotech) containing PMSF (KeyGEN Biotech) at 4°C, 15 min. After ultrasonicated 10 min, the samples were centrifuged at 13,684.32 g for 10 min, and the supernatants were collected and boiled with standard SDS sample buffer. The samples were resolved by SDS‐PAGE, and Western blotting analysis was performed for detection of the following antigens: p‐ERK1/2, ERK1/2, β‐actin, Histone (Cell Signalling Technology), Orai1, Orai2, Orai3, Collagen I, α‐SMA, STIM1 (Sigma‐Aldrich), NFAT1, Calpain, CRACR2A, SEPTIN4, STIMATE, GOLLI, SARAF and ORMDL3. After incubation with a secondary antibody, signal intensities were analysed by using the Odyssey infrared Image System (Licor).
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5

Western Blots of Signaling Proteins

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Western blots were performed using 10%, 4-20% or 10-20% tris-glycine
gels (Invitrogen) regarding the size of the studied proteins. Used primary
antibodies were GAPDH (Millipore), STIM1 (Sigma Aldrich), SERCA2a (home made),
phospho and total GSK 3 β, Akt (total, S473, T308), mTOR, Rictor, mSN1,
mLTS8, Foxo3 (S253, total), PRAS40 (T246, total) and Caspase3 (all from Cell
Signaling). Secondary antibodies were appropriate HRP-linked antibodies (Sigma
Aldrich).
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6

Cardiac Protein Phosphorylation Analysis

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Isolated ventricular myocytes and/or ventricular tissue were digested in RIPA Buffer (Sigma) with protease and phosphatase inhibitors (Sigma). Protein concentrations were determined by Bradford assay. Cardiac homogenates (25‐50 µg) were subjected to 4%‐15% SDS PAGE (Bio‐Rad) and blotted onto nitrocellulose membranes (Bio‐Rad). Phosphorylation status of proteins was detected using phospho‐specific and total protein antibodies including RyR2‐Ser‐2814 (Badrilla A010‐31AP), RyR Total (Thermo Fisher #MA3‐916), CaMKII‐Thr‐287 (PA5‐37833), total CaMKII (Cell Signaling 3362S) and GAPDH (Fitzgerald #G109a). The ratio between phospho/total protein was obtained for values. For STIM1 (Sigma, #S6072) and Orai1 (Alomone Labs, #ALM‐025), expression was normalized to GAPDH levels. GAPDH was used as a loading control. Images were processed with ImageJ software (NIH).
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