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4 protocols using sytox green

1

Pyroptosis Assessment in Neuroprotection

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To determine whether pyroptosis was involved in the neuroprotection of IPC, the double staining of Annexin V-mCherry and SYTOX green (Beyotime, Shanghai, China) was assessed. After 6 or 24 h following IPC and/or OGD, the BV-2 cells were harvested and seeded, at a density of 5 × 104 cells per well, onto 24-well plates. After being centrifuged at 1000 rpm for 5 min, the cell culture medium was removed and the cells were rinsed with PBS. Then, Annexin V-mCherry binding buffer (194 μL) together with Annexin V-mCherry (5 μL) and SYTOX green (1 μL) was added. After incubation for 20 min at 20 °C in dark, the cells were washed and imaged to determine their fluorescence levels with a confocal microscope (Leica, Wetzlar, Germany). Positive cells were identified by colocalization with the Annexin V–mCherry Red and SYTOX green.
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Immunomodulatory Agents in Inflammatory Conditions

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High glucose Dulbecco’s Modified Eagle Medium (DMEM), trypsin and penicillin–streptomycin, were obtained from Macgene (Beijing, China). Fetal bovine serum (FBS) was from PAN-Biotech (Aidenbach, Germany). Complete/Incomplete Freund’s adjuvant and LPS were from Sigma-Aldrich (St Louis, MO, USA). Bovine type II collagen was from Macklin (Shanghai, China). Methotrexate was obtained from Bidepharm (Shanghai, China). 4% paraformaldehyde was from Bioroyee Biotechnology (Beijing, China). EDTA and DAPI were from Solarbio (Beijing, China). Goat anti-rabbit secondary antibody, endogenous peroxidases blocker and goat serum albumin were from ZSGB-Biotech ((Beijing, China). PMA are purchased from Med Chem Express (MCE). Hoechst 33342 was obtained from TargetMol (Shanghai, China). Sytox Green was from Beyotime (Shanghai, China). Primary antibody of IL-6 was from Bioss (Beijing, China). Primary antibody of TNF-α was from Proteintech (Chicago, IL, USA). Primary antibodies against PI3K/p-PI3K were from Bioworld (St. Louis Park, MN, USA). Primary antibodies against p-Akt and p-mTOR were bought from Cell Signaling Technology (Beverly, MA, USA). Primary antibody against Akt was from Biogot (Nanjing, China). Antibodies of mTOR, MPO, CitH3 were from Abcam (Cambridge, UK).
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Quantifying CT26 Cell Apoptosis

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CT26 cells were seeded in 12-well plates at a cell density of 1 × 105 cells per well and allowed to grow overnight. Cells were treated with 100 nM NP-IDO-APT, NP-Scr-APT, or NPs at different times. The apoptosis of CT26 cells was determined by a cell apoptosis detection kit with Annexin V-mCherry and SYTOX Green (Beyotime) according to the manufacturer’s protocol. Briefly, cells were digested and washed by PBS once, followed by staining with 5 μL Annexin V-mCherry and 1 μL SYTOX Green in 200 μL Binding Buffer for 15 min at room temperature. Stained cells were analyzed by flow cytometry immediately.
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Analyzing Cell Death and Viability

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Cell death was also analyzed by staining for SYTOX Green (#C1070S, Beyotime), at the same time, living cell staining by CM-Dil (#C7000, Invitrogen). Next, images were acquired to use confocal microscope (Leica, Germany).
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