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Xevo g2 xs qtof quadrupole time of flight mass spectrometer

Manufactured by Waters Corporation
Sourced in United States

The Xevo G2-XS QToF quadrupole time-of-flight mass spectrometer is a high-resolution mass spectrometry instrument designed for quantitative and qualitative analysis. It utilizes a combination of quadrupole and time-of-flight mass analyzers to provide accurate mass measurements and high-resolution separation of complex samples.

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5 protocols using xevo g2 xs qtof quadrupole time of flight mass spectrometer

1

Phenolic Compound Identification by UPLC-QTOF-MS

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Phenolic compound tentative identification was made according to Fonseca-Hernández et al. [27 (link)]. A chromatographic method was performed on a Waters Acquity UPLC H-Class system (Milford, MA, USA). Chromatographic separation was done at 40 °C with a flow rate of 0.3 mL/min on an Acquity UPLC BEH C18 column (2.1 × 50 mm, 1.7 µm). The mobile phase consisted of two eluent solvents: (A) acetonitrile with 0.3% formic acid and (B) Mili-Q water 0.3%. The gradient elution was as follows: 90% A at 0–1 min, 90–30% A at 1–11 min, 30–90% A at 11–12 min, 90% at 12–15 min. The injection volume was set at 8 µL.
Mass spectrometry (MS) analysis was performed on a Water Xevo G2-XS QToF quadrupole time-of-flight mass spectrometer, with an electrospray ionization (ESI) interface (Milford, MA, USA). The MS acquisition was operated in negative ion mode, with a mass range of m/z 50 to 800. The parameters were: capillary voltage: 2.5 kV, cone voltage: 40 kV, source temperature: 100 °C, desolvation temperature: 250 °C, collision energy: 6.0 eV. MassLynx 4.1 MS software (Milford, MA, USA) was used to process data.
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2

High-Resolution Electrospray Ionization Mass Spectrometry

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High resolution electrospray ionization
mass spectrometry was performed in the School of Chemistry at the
University of Birmingham on a Waters Xevo G2-XS QTof Quadrupole Time-of-Flight
mass spectrometer.
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3

Intact Protein Analysis by LC-MS/MS

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LC/MS experiments were performed on a Waters ACQUITY UPLC coupled with a Waters Xevo G2-XS Q-TOF (Quadrupole Time-of-Flight) mass spectrometer (Waters Corporation). The MilliporeSigma BIOshell IgG C4 column (1,000 Å, 2.1 × 100 mm, 2.7 μm) was also used for LC/MS peak separation. LC/MS was run in a similar fashion as RP-UPLC (Table 1) with modified mobile phases to be more compatible with mass spectrometry detector. In LC/MS, mobile phase A consists of 0.1% formic acid and 0.025% TFA in LC/MS grade water, whereas mobile phase B consists of 0.1% formic acid and 0.025% TFA in acetonitrile.
Mass spectra were obtained in positive mode by spraying the eluent into the mass spectrometer using an electrospray ionization source. The capillary, source cone, and extraction cone voltages were set at 3 kV, 50 V, and 80 V, respectively. Nitrogen was used as a desolvation gas at a flow rate of 600 L/h. The source and desolvation temperatures were set at 120°C and 400°C, respectively. The instrument was operated in Sensitivity mode and spectra were acquired in an m/z range of 400–3,000. Data acquisition and analysis (deconvolution) were performed with Waters (MassLynx 4.1 software). Protein spectra were deconvoluted to obtain the observed intact protein masses. A uniform Gaussian model was used with width at half height of either 1 or 0.8.
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4

Intact Mass Analysis of Bioconjugates

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Intact mass analysis was performed on a Xevo G2-XS QTof Quadrupole Time-of-Flight Mass Spectrometer coupled to an ACQUITY UPLC H-class system (Waters) using a Jupiter 300 C5 column (2mm*50mm, Phenomenex). Protein samples were resuspended in 2% acetonitrile, 0.1% trifluoroacetic acid and loaded/separated on the C5 column at a flow rate of 0.25 mL/min. 2 μg of each bioconjugate (K2-EPA and O1-EPA) was desalted on column for 2 min with Buffer A (2% acetonitrile 0.1% formic acid) before being separated by altering the percentage of Buffer B (80% acetonitrile, 0.1% formic acid) from 0% to 100% over 10 min. The column was then held at 100% Buffer B for 0.5 min before being equilibrated for 1 min with Buffer A, for a total run time of 13.5 min. Samples were infused into the Xevo G2-XS QTof Quadrupole Time-of-Flight Mass Spectrometer using electrospray ionization (ESI) and MS1 mass spectra acquired with a mass range of 400–2000m/z at 1 Hz. Scans across the apex of the elution peaks were summed then peak lists exported. Deconvolution of proteoforms within K2-EPA and O1-EPA were undertaken using UniDec [54 (link)].
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5

Rhamnolipid Congener Analysis by UPLC-QTOF-MS

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Three rhamnolipid purification samples were applied for congener analysis. Sample A was the rhamnolipids obtained from P. aeruginosa SW1 without pH control in Erlenmeyer flask fermentation; Sample B was the rhamnolipids obtained from P. aeruginosa SW1 by fermentation using a fermenter at pH 5.5; Sample C was the rhamnolipids obtained from mutant strain E7 by fermentation using a fermenter at pH 5.5. These samples were analyzed using a Waters Xevo G2-XS Q-TOF (quadrupole time-of-flight) Mass Spectrometer (Waters Corporation, Milford, MA, USA) coupled with a Waters ACQUITY UPLC equipped in negative mode (Waters Corporation, Milford, MA, USA). The analysis method was based on Déziel’s method [19 (link)] with slight modifications. Briefly, a C18 reverse-phase column with 20 µL of sample was used at a flow rate of 0.5 mL/min. An acetonitrile (purity suitable for LC-MS, Merck Millipore, Burlington, MA, USA)–water gradient was used, starting with 10% acetonitrile for 1 min, increasing to 60% acetonitrile in 10 min and holding for 5 min. Ten percent of the flow was introduced into the mass spectrometer. The capillary voltage was set to 3.8 kV, the cone voltage was set to 35 V and the source temperature was kept at 100 °C. The scan mass range was 50–800 Da.
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