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4 protocols using rabbit polyclonal anti sox2

1

Histological and Immunohistochemical Analysis of Tumor Samples

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Tumors generated in mice were dissected, fixed in 10% formalin for 48 h, and embedded in paraffin. Four micrometer-thick sections were stained with hematoxylin–eosin (H&E) using a Varistain Gemini ES machine (ThermoFisher, Waltham, MA, USA). For immunohistochemistry (IHC), sections were rehydrated and heated in citrate buffer pH 6 for 10 min for antigen retrieval. Endogenous peroxidase was blocked with 5% hydrogen peroxide in methanol for 15 min. Sections were incubated with the following primary antibodies: rabbit polyclonal anti-SOX9 (1:1000 dilution; Millipore), mouse monoclonal anti-phospho-STAT3 (Tyr705) (1:100 dilution; Cell Signaling), mouse monoclonal anti-PML (PG-M3) (1:200 dilution; Santa Cruz Biotechnology), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and rabbit polyclonal anti-Ki67 (1:1000 dilution; Abcam). Sections were then incubated with MACH 3 Rabbit HRP-Polymer (BioCare Medical). Staining was developed with 3,3’-diaminobenzidine (DAB) (Spring Bioscience, Pleasanton, CA, USA). IHC images were obtained with a Nikon Eclipse 80i microscope.
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2

Antibody Panel for Stem Cell Analysis

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The following antibodies were purchased from Abcam (Cambridge, MA): rabbit polyclonal anti-Oct4, anti-bax rabbit monoclonal, rabbit polyclonal anti-Sox2, rabbit polyclonal to Cyclin D1, mouse monoclonal IgG to β-actin, mouse anti-β-actin mAb, anti-Bcl-2 antibody, FITC- polyclonal goat anti-rabbit IgG. Rabbit anti-goat IgG—Rhodamine conjugate from Millipore (Billerica, MA); 4'-6′-diamidino-2-phenylindole nuclear stain (DAPI) and green phalloidin were purchased from Invitrogen (Carlsbad, CA). Anti-human CD44-PE, and anti-human CD24-FITC were purchased from BD Biosciences (Franklin Lakes, NJ). PE-anti-rabbit IgG was purchased from Santa Cruz Biotechnology (Santa Cruz, CA).
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3

Immunoblot Analysis of Transcription Factors

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Immunoblots were performed as previously described [50 (link)]. The following primary antibodies were used: rabbit polyclonal anti-SOX9 (1:2000 dilution; Millipore, Burlington, MA, USA), mouse monoclonal anti-STAT3 (1:1000 dilution; Cell Signaling), rabbit monoclonal anti-phospho STAT3 (Tyr705) (1:1000 dilution; Cell Signaling), rabbit polyclonal anti-PML (1:1000 dilution; Bethyl laboratories, Montgomery, TX, USA), rabbit polyclonal anti-SOX2 (1:500 dilution; Millipore), and mouse monoclonal anti-β actin (1:2000 dilution; Sigma-Aldrich). Primary antibodies were detected with horseradish peroxidase (HRP)-linked antibodies: Goat anti-rabbit or goat anti-mouse (Santa Cruz Biotechnology, Dallas, TX, USA). Protein detection was performed using the NOVEX® ECL system (Invitrogen, Carlsbad, CA, USA).
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4

Immunocytochemical Characterization of Neural Cells

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Cells were fixed with 4% paraformaldehyde in PBS, pH 7.4 at the end of proliferation and differentiation stages. Immunocytochemistry assays were performed following standard protocols [57 (link)]. Briefly, cells were permeabilized and blocked for 1 hour with 0.3% Triton X-100 and 10% normal goat serum (NGS) in PBS. Cells were incubated overnight at 4°C with the following primary antibodies diluted in PBS containing 10% NGS: rabbit polyclonal anti-β-III Tubulin (1:2000, Covance); rabbit polyclonal anti-glial fibrillary acidic protein (GFAP; 1:2000, DAKO); mouse monoclonal antibody anti-microtubule associated protein 2 (MAP2; 1:500, Chemicon); mouse monoclonal anti-Nestin (1:100, Developmental Studies Hybridoma Bank); rabbit anti-Nestin (1:1000, Covance); rabbit polyclonal anti-TH (1:1000; Pel-freez); rabbit polyclonal anti-Sox2 (1:200; Millipore). Appropriate Alexa-Fluor secondary antibodies were used diluted in PBS (1:1000; Molecular Probes) containing 10% NGS. Nuclei were stained with Hoechst 33258 (1 ng/mL; Sigma). Immunostainings were analyzed with an epifluorescence microscope (Nikon, Eclipse TE2000-U) and photographed with a Nikon digital camera (DMX1200 F). Negative controls were performed in the absence of primary antibodies and showed no unspecific staining.
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