The largest database of trusted experimental protocols

5 bromo 2 deoxyuridine 5 brdu

Manufactured by Merck Group
Sourced in United States

5-bromo-2'-deoxyuridine (5-BrdU) is a synthetic nucleoside analog that is structurally similar to the DNA base thymidine. It can be incorporated into the DNA of dividing cells during the S (synthesis) phase of the cell cycle, in place of thymidine.

Automatically generated - may contain errors

5 protocols using 5 bromo 2 deoxyuridine 5 brdu

1

Cardiomyocyte Isolation and Hypoxia Exposure

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cardiomyocytes were isolated from 1- to 3-day old C57BL/6 mice according to the procedures described in our previous studies [23 (link), 53 (link)]. In brief, after the heart tissue was dissected and washed, it was finely minced and the chunks were placed in 0.25% trypsin. The pooled cell suspension was centrifuged and resuspended in Dulbecco’s modified Eagle’s medium (DMEM) supplemented with 10% fetal bovine serum, 100 U/mL penicillin, and 100 μg/mL streptomycin. The resuspension was cultured in a tissue culture flask for 90 min at 37°C to allow the fibroblasts to attach to the flask bottom [54 (link)]. The non-adherent and weakly attached cells, mainly cardiomyocytes, were removed and seeded into culture plates. Next, 5-bromo-2’-deoxyuridine (5-BrdU, 10 nM; #B5002; Sigma, Saint Louis, USA) was added to the culture medium to remove fibroblasts. The cells were incubated at 37°C in a humidified atmosphere containing 5% CO2 and 95% air. After 48 h, cardiomyocytes that adhered to the culture dish were used for subsequent experiments [55 (link)]. Cells were deprived of serum and placed in an anoxic chamber for 12 h in a humidified atmosphere comprising 5% CO2 and 95% N2.
+ Open protocol
+ Expand
2

Immunoblotting of Rho GTPases and Regulators

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used the following primary antibodies: mouse-anti-Rac1 (BD Transd. Laboratories, 610650), mouse-anti-p190A (BD Transd. Laboratories, 610149), mouse-anti-RhoA (26C4, Santa Cruz, sc-418), mouse–anti-RGS3 (CC-Q7, Santa Cruz, sc-100762), rabbit–anti-Tiam1 (C-16, Santa Cruz, sc-872), rabbit–anti-Gβ (T-20, Santa Cruz, sc-378), rabbit–anti-RGS3 (Abcam, ab2564), mouse–anti-c-myc (Klon 9E10, Oncogene), mouse–anti-β-actin (Sigma-Aldrich, A2228), mouse–anti-RhoA-GTP (Biomol). The corresponding horseradish peroxidase-conjugated secondary antibodies were from Sigma-Aldrich (Saint Louis, MO, USA, A-9044, A-9169), the fluorescent labelled secondary antibodies (anti-mouse-Alexa Fluor® 568-antibody, anti-rabbit-Alexa Fluor® 633-antibody) were from Life Technologies. In this study, the following reagents and inhibitors were used: FGF-2 (Promega), carbamoylcholine chloride (carbachol), 5-bromo-2′-deoxyuridine (5-BrdU) (Sigma-Aldrich), PI3K-inhibitor LY294002 (2-(4-morpholinyl)-8-phenyl-1(4H)-benzopyran-4-one hydrochloride; Alexis), pertussis toxin (PTX; Calbiochem), H1152P ((S)-(+)-2-Methyl-1-[(4-methyl-5-isoquinolinyl)sulfonyl]homopiperazine, 2HCl, Merck).
+ Open protocol
+ Expand
3

Isolation and Culture of Chondrocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
The suppliers and the catalog numbers of the reagents are as follows. Dulbecco’s modified Eagle’s medium (DMEM) (Life Technologies, Carlsbad, CA, United States ; 22,400–089), fetal bovine serum (Life Technologies; 10,099), antibiotic-antimycotic (Life Technologies; 15,240–112), phosphate-buffered saline (PBS) (Life Technologies; 10010-049, pH7.4), trypsin-EDTA (Life Technologies; 25300-054, 0.05%), bovine serum albumin (Life Technologies; 15560012); D-Hanks solution (Beyotime, Jiangsu, China; C0218); type II collagenase (Sigma, St. Louis, MO, United States ; C6885); 5-bromo-2'-deoxyuridine (5-BrdU) (Sigma; B5002); Cell Counting Kit-8 (CCK-8; DOJINDO, Kumamoto, Japan; CK04), IRDye 680CW (Licor, Lincoln, NE, United States ), protein molecular weight markers (Beyotime; P0066), BCA protein concentration determination kit (Solarbio, Beijing, China; PC0020). Antibodies: anti-glycogen synthase kinase beta (GSK3β) (Cell Signaling Technology (CST), Danvers, MA, United States ; 12,456), anti-AKT serine/threonine kinase 1 (AKT1) (CST; 2,967), anti-AKT serine/threonine kinase 2 (AKT2) (CST; 2,962), anti-β-catenin (Abcam, Cambridge, MA, United States ; ab24925), and anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Abbkine, Wuhan, China; Abp57259).
+ Open protocol
+ Expand
4

Investigating Rho GTPase Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used the following primary antibodies: mouse-anti-RhoA (26C4, Santa Cruz, Heidelberg, Germany, sc-418), mouse-anti-Rac1 (BD Transd. Laboratories, Heidelberg, Germany, 610650), mouse-anti-p190RhoGAP (p190A) (BD Transd. Laboratories, 610149), mouse-anti-p190B (BD Transd. Laboratories, 611612), mouse-anti-RGS3 (CC-Q7, Santa Cruz, sc-100762), mouse-anti-caveolin-3 (BD Transd. Laboratories, 610421), mouse immunoglobulin G (IgG) (Santa Cruz sc-2025), rabbit-anti-caveolin-3 (H-100, Santa Cruz, sc-28828), mouse-anti-eNOS (BD Transd. Laboratories, 610297), rabbit-anti-phospho-1177Ser-eNOS (Cell Signaling Technology, Frankfurt, Germany, #9571), rabbit-anti-Nitrotyrosine (Millipore, Darmstadt, Germany, 06-284). The corresponding horseradish peroxidase-conjugated secondary antibodies were from Sigma-Aldrich (Munich, Germany, A-9044, A-9169). In this study, the following reagents and inhibitors were used: carbamoylcholine chloride (carbachol, Sigma-Aldrich, Munich, Germany, C4382), 5-bromo-2′-deoxyuridine (5-BrdU) (Sigma-Aldrich), methyl-β-cyclodextrin (MβCD, Sigma-Aldrich, M7439), (2S)-2-amino-5-(1-aminoethylideneamino)pentanoic acid; dihydrochloride (L-NIO dihydrochloride, Santa Cruz, sc-361229), Nω-nitro-L-arginin-methylester-hydrochloride (L-NAME, Sigma-Aldrich, 72760).
+ Open protocol
+ Expand
5

Tracking ADSC Survival in Wound Healing

Check if the same lab product or an alternative is used in the 5 most similar protocols
ADSCs were marked with 5-bromo-2′-deoxyuridine (5-BrdU; Sigma-Aldrich) prior to injection. Cells suspended in serum-free DMEM were treated with BrdU solution at a final concentration of 10 mmol/l at 37°C for 48 h. 1×106 ADSCs that were pretreated with 0.5mg/l SDF-1 or untreated were injected around the wound bed. The animals were sacrificed 7 days after treatment, and wounds were harvested with the surrounding tissue. The specimens were fixed with 4% paraformaldehyde for 24 h and embedded in paraffin for histological sectioning. FITC immunofluorescence staining was performed according to the manufacturer's instructions (Beijing Zhongshan Golden Bridge Biotechnology Co., Ltd., Beijing, China); primary mouse monoclonal anti-BrdU antibodies (1:1,000; cat. no. sc-51514; Santa Cruz Biotechnology, Inc.) and FITC-labeled goat anti-mouse secondary antibodies (1:1,000; cat. no. sc-2010; Santa Cruz Biotechnology, Inc.) were added in sequence. Immunofluorescence microscopy was used, and the green fluorescence indicated 5-BrdU-labeled ADSC nuclei. Counting was conducted in 10 immunofluorescent images per group to determine the survival rate.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!