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4 protocols using cp690550

1

Interleukin-10 Signaling Pathway Analysis

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Recombinant mouse IL-10 was purchased from R&D Systems. LY294002 and rapamycin were purchased from Calbiochem (EMD Millipore). CP-690550 and STO-609 were purchased from Tocris Biosciences. Western blot detection of specific proteins used the following primary Abs: anti-phospho-AMPKα (Thr172), anti-AMPKα, anti-phospho-PI3 kinase p85 (Tyr458)/p55 (Tyr199), anti-PI3 kinase p55, anti-PI3 kinase p85, anti-phospho-Akt (Ser473), anti-phospho-Akt (Thr308), anti-Akt, anti-phospho-mTOR (Ser2448), anti-mTOR, anti-phospho-p70 S6K (Ser371), anti-p70 S6K, anti-phospho-TSC2 (Ser939), anti-phospho-TSC2 (Ser1387), anti-TSC2, anti-phospho-Stat3 (Tyr705), anti-phospho-Stat3 (Ser727), anti-Stat3, anti-phospho-JAK1 (Tyr1022/1023), anti-JAK1, anti-SOCS3, anti-phospho-NF-κB (Ser536), anti-NF-κB, anti-IκB (Cell Signaling Technology), anti-β-actin (Sigma-Aldrich), and HRP-conjugated secondary Ab (Jackson ImmunoResearch Laboratories).
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2

UPLC-MS-MS Quantification of Deuterated and Non-Deuterated Standards

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Deuterated and non-deuterated LM standards for ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS-MS) quantification were purchased from Cayman Chemical/Biomol GmbH (Hamburg, Germany). Archazolid A was isolated from Archangium gephyra as previously described (17 (link)). Bafilomycin A1 was obtained from Sigma-Aldrich (Taufkirchen, Germany), CP-690,550 and GSK-2033 were obtained from Tocris Bioscience (Bristol, UK), JQ-1 was from AdooQ Bioscience (Irvine, CA, USA), LY294002 was from Cytoskeleton (Denver, CO, USA), skepinone-L and Torin 1 were from Cayman chemical (Ann Arbor, MI, USA), and U0126 was from Enzo Life Sciences (Farmingdale, New York, USA). AS1517499 and all other reagents were obtained from Sigma-Aldrich (Taufkirchen, Germany) unless mentioned otherwise.
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Synthesis of Imidazo[1,2-a]pyridine-Based RORγt Inhibitor

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Cpd A, [(S)-N-(8-((4-(5-(tert-butyl)-1,2,4-oxadiazol-3-yl)-3-methylpiperazin-1-yl)methyl)-7-methylimidazo[1,2-a]pyridin-6-yl)-6-methylnicotinamide] was synthesized as described in Figure S1. Briefly, the 2-methylpyrimidine-5-carboxamide group of (S)-N-(8-((4-(5-(tert-butyl)-1,2,4-oxadiazol-3-yl)-3-methylpiperazin-1-yl)methyl)-7-methylimidazo[1,2-a]pyridin-6-yl)-2-methylpyrimidine-5-carboxamide [prepared as described in Hintermann et al. (34 (link))] was cleaved with sodium hydroxide. The intermediate amine was subsequently converted into Cpd A by reaction with 6-methylnicotinic acid using T3P as the amide-coupling reagent.
The published RORγt inhibitor SR2211 (42 (link)) and the pan-JAK inhibitor CP690550 (43 (link)) were purchased from Tocris.
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4

Skin Dendritic Cell Inhibitor Assay

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Epidermis was separated from the dermis and single-cell suspensions were prepared and cultured for 18 hr at 37 C prior to analysis by flow cytometry. For inhibitor experiments, single-cell suspensions of skin DCs were prepared from epidermis and treated with or without various inhibitors for 18 hr at 4 C or 37 C: IKKb inhibitor BI605906 (Zhang et al., 2014) , 10 and 50 mM; JAK3 inhibitor CP690550 (Tocris), 1 mM; anti-mouse TGF-b1 neutralizing Ab (Uyttenhove et al., 2011) , 10 mg/ml; anti-mouse CSF2 neutralizing Ab (eBioscience), 5 mg/ml.
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