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3 protocols using pe conjugated anti mouse f4 80

1

Lymph Node Immune Cell Analysis

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On day 14 post-surgery, single-cell suspension was prepared from draining submandibular and cervical lymph nodes. The expression of CD4+ T cells and macrophages in the peripheral lymph nodes were analyzed using flow cytometry. Upon resuspension in binding buffer at a density of 2 × 107 cells/ml, the cells were then stained with APC-CY7 conjugated anti-mouse CD45 (#561037, BD Biosciences), AF700 conjugated anti-mouse CD3 (#557984, BD Biosciences) and FITC conjugated anti-mouse CD4 (#561831, BD Biosciences) to label the surface markers of CD4+ T cells. The surface markers of macrophages were detected by APC-conjugated anti-mouse CD11B (#561039, BD Biosciences) and PE-conjugated anti-mouse F4/80 (#565410, BD Biosciences).
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2

Flow Cytometric Analysis of Immune Cells

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Flow cytometric analysis of single-cell suspensions from the corneas,10 (link) spleen,53 (link) bone marrow,54 (link) and peripheral blood55 (link) was performed as previously described. Single cells were blocked in flow cytometry staining buffer (cat. 00-4222, eBioscience, San Diego, CA, USA) containing anti-mouse CD16/32 antibody (cat. 14-0161-85, eBioscience) for 10 minutes at room temperature. The cells were then incubated for 30 minutes at room temperature with the following antibodies (diluted 1:100): APC-conjugated anti-mouse CD45 antibody (cat. 559864, BD Biosciences, San Jose, CA, USA), Brilliant Violet 421–conjugated anti-mouse CD64 (cat. 139309, BioLegend, San Diego, CA, USA), Brilliant Violet 421–conjugated anti-mouse Lineage Cocktail (cat. 139309, BioLegend), PE-conjugated anti-mouse F4/80 (cat. 565410, BD Biosciences), FITC-conjugated anti-mouse Ly-6G (cat. 551460, BD Biosciences), PerCP-conjugated anti-mouse CD11b (cat. 45-0112-82, Thermo, Waltham, MA, USA), and PE-CY7-conjugated anti-mouse Ly6C (cat. 25-5932-82, eBioscience). Cells labeled with fluorescent antibodies were run on a flow cytometer (BD Canto Plus, BD Bioscience, San Jose, CA, USA), and the resulting data were analyzed using FlowJo flow cytometry analysis software (version 10, Ashland, OR, USA).
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3

Intracellular PTX3 and Immune Cell Analysis

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To analyze PTX3 intracellular expression, transfected HEK 293T cells were fixed with 2% PFA and permeabilized with 0.1% Saponin (Sigma Aldrich) in PBS. Indirect intracellular staining was performed with rat anti-PTX3 (MNB4, Abcam) primary antibody, followed by AF488-conjugated anti-rat (Life Technologies) secondary antibody. To identify the various cell populations present in splenocytes, peritoneal lavage and quadriceps harvested from mice, cells were first incubated with anti-mouse CD16 / CD32 (FC block, BD Pharmingen) and stained with the following antibodies: APC-conjugated anti-mouse GR1, PE-conjugated anti-mouse F4/80, FITC-conjugated anti-mouse CD11b, APC-conjugated anti-mouse Ly6c, APC-conjugated anti-mouse CD3, FITC-conjugated anti-mouse CD19, PE-conjugated anti-mouse CD45, or PE-Cy7-conjugated anti-mouse NK1.1 (BD Pharmingen). For detection of alphavirus antigens, indirect intracellular staining was performed using mouse monoclonal anti-alphavirus (3581, Santa Cruz) primary antibody, followed by AF488-conjugated anti-mouse (Life Technologies) secondary antibody. Data acquisition was performed using CyanADP (Beckman Coulter), and analysis was done by Kaluza Flow Analysis Software (Beckman Coulter).
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