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4 protocols using anti lamin a c

1

Immunoprecipitation and Western Blot Analysis of Circadian Clock Proteins

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The cells were lysed with lysis buffer containing 50 mM Tris–HCl, pH 7.4, 0.1% SDS, 0.25 mM deoxycholate, 150 mM NaCl, 2 mM EGTA, 0.1 mM Na3VO4, 10 mM NaF, 1 mM PMSF, and complete Protease Inhibitor (Roche). The lysates were then sonicated and centrifuged to collect the supernatant. Immunoprecipitation was carried out using an anti-PER2 antibody overnight at 4 °C. Protein A (Pierce) was used to collect the antibody-protein complex and precipitates were washed three times with lysis buffer. Lysates and immunoprecipitates were separated by SDS-PAGE and Immunoblotting was performed as described previously8 (link). We used anti-PER24 (link), anti-BMAL1 (abcam), anti-CLOCK (Thermo Scientific), anti-Lamin A/C (BD Bioscience), anti-GAPDH (Ambion), anti-HA (Cell signaling), anti-FLAG (Sigma), and anti-mPML (Upstate) antibodies.
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2

Cell Signaling Pathway Analysis Protocol

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RPMI, DMEM, and FBS were from Invitrogen. Hygromycin B and puromycin were from Gibco. Primary antibodies used were anti-HA (Cell Signaling Technology, catalog number C29F4), anti-pHistoneH3 (S10) (Abcam, catalog number ab14955), anti-LaminA/C (BD Biosciences, catalog number 612162), anti-GAPDH (Sigma-Aldrich, catalog number CB1001), and anti-β-actin (Santa Cruz Biotechnology, Inc., catalog number sc-1616). Secondary HRP-conjugated antibodies used were goat anti-rabbit (Cell Signaling Technology, catalog number 7074S) horse anti-mouse (Cell Signaling Technology, catalog number 7076S) and donkey anti-goat (Santa Cruz Biotechnology, Inc., catalog number sc-2020). Chemiluminescence reagent for Western blotting was SuperSignal™ West Pico PLUS. Mounting media for fluorescence microscopy was ProLong® Gold Antifade Reagent with DAPI. LPA supplied in chloroform was from Avanti Polar Lipids {Acyl-linked 18:1 lysophosphatidic acid [1-oleoyl-2-hydroxy-sn-glycero-3-phosphate (sodium salt)]}. For sulfenylation studies, DCP-Bio1 was from by Xoder Technologies (Winston Salem, NC), sepharose CL-4B resin was from Sigma, and high capacity streptavidin agarose resin was from Thermo Scientific. Propidium iodide and the nucleotides GTP and dATP were from Invitrogen.
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3

Reagents and Antibodies for Western Blotting

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Reagents and antibodies used in this study were purchased from miscellaneous sources. Cycloheximide (MP Biomed, # 100183) was used at 1 µg/ml for different time points. MG132 (HiMedia, 474787-10MG) was used at 10 µM concentration for 8 h. The antibodies used for western blotting are anti-Nup88 (BD Biosciences, # 611896, 1:2000 dilutions), anti-Nup62 (BD Biosciences, # 610497, 1:6000 dilutions), anti-GAPDH (Abgenex, # 10-10011, 1:6000 dilutions), anti-GFP (Santa Cruz, # 9996 1:5000 dilutions), anti-GST (1:500 dilutions), anti-HA (Sigma, # H6908, 1:2000 dilutions), anti-FLAG (Sigma, # F7425, 1:2000), anti-Actin (BD Biosciences, # 612656, 1:5000 dilutions), anti-Lamin A/C (BD Biosciences, # 612162, 1:2000 dilutions), anti-NFκB p65 (BD Biosciences, # 610868, 1:2000 dilutions), goat anti-rabbit IgG-HRP (GeNei, # 114038001A, 1:10000 dilutions), goat anti-mouse IgG-HRP (GeNei, # 114068001A, 1:10000 dilutions). A polyclonal antibody was generated against Nup88 by immunizing rabbits with Nup88 fragment (aa 1 - 584) lacking the C-terminal coiled coil-domain as an antigen. Antibodies were purified from immunized serum over NHS-Sepharose beads immobilized with appropriate antigen.
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4

Comprehensive Antibody-based Protein Analysis

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Antibody sources were as follows: anti-HRF/TCTP (MBL); anti-Phospho-TCTP (Ser46) (Cell Signaling); anti-c-Myc (Cell Signaling); anti-PARP (Cell Signaling); anti-HER2/ErbB2 (Cell Signaling); anti-cleaved caspase 3 (Cell Signaling); anti-Ub (P4D1); anti-β-actin (Sigma-Aldrich); anti-Lamin A/C (BD Biosciences); anti-α-Tubulin (Sigma-Aldrich).
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