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3 protocols using optima ammonium acetate

1

Metabolomic Analysis of Cell Lines

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FBS, penicillin, and streptomycin were purchased from HyClone Laboratories. RPMI 1640 medium and charcoal-stripped FBS were purchased from Thermo Fisher. Dialyzed FBS was from Life Technologies. Optima ammonium acetate, ammonium hydroxide, Optima liquid chromatography–mass spectrometry (LC-MS) grade, acetonitrile, methanol, and water were purchased from Fisher Scientific. U-13C glucose, U-13C glutamine, and 2,3,3-2H serine were obtained from Cambridge Isotope Laboratories. U-13C palmitate, C16-ceramide, and C2-ceramide were purchased from Sigma-Aldrich.
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2

Metabolomic Analysis of Cell Lines

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FBS, penicillin, and streptomycin were purchased from HyClone Laboratories. RPMI 1640 medium and charcoal-stripped FBS were purchased from Thermo Fisher. Dialyzed FBS was from Life Technologies. Optima ammonium acetate, ammonium hydroxide, Optima liquid chromatography–mass spectrometry (LC-MS) grade, acetonitrile, methanol, and water were purchased from Fisher Scientific. U-13C glucose, U-13C glutamine, and 2,3,3-2H serine were obtained from Cambridge Isotope Laboratories. U-13C palmitate, C16-ceramide, and C2-ceramide were purchased from Sigma-Aldrich.
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3

HPLC-MS Compound Quantification Protocol

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High performance liquid chromatography (HPLC) grade methanol, acetonitrile, and Liquid chromatography-mass spectrometry (LC-MS) grade (Optima™) ammonium acetate were purchased from Fisher Scientific (Loughborough, UK). A total of 141 compounds were targeted in this study. All analytical standards were of a purity of ≥97%. Ultra-pure water was obtained from a Millipore Milli-Q water purification system with a specific resistance of 18.2 MΩ cm or greater (Millipore, Bedford, MA, USA). Stock solutions (1 mg mL−1) were prepared in methanol (MeOH) or acetonitrile (MeCN) and stored in silanised amber vials (20 mL). Working solutions were prepared daily in ultra-pure water, as required. All solutions were stored at −20 °C and in the dark to reduce possible degradation.
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