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6 protocols using anti 6e10

1

Quantifying Synaptic Proteins in Hemibrain

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Aliquots of protein lysates (30 µg) prepared from hemibrains homogenized in RIPA buffer were loaded in Criterion XT 4–20% Bis-Tris gels and transferred onto PVDF membrane (0.45μm; Millipore, Billerica, MA, USA). Membranes were probed with anti-6E10 (1:2000, cat#9320–500, Covance, Princeton, NJ, USA), anti-Synapsin-1 (1:1000, cat#106103, Synaptic Systems, Göttingen, Germany), and anti-PSD-95 (1:1000, cat#MAB1596, Millipore, Billerica, MA, USA) antibodies and subsequently incubated with anti-rabbit or anti-mouse HRP-conjugated secondary antibodies (1:2000, cat#PI-1000 or PI-2000, Vector laboratories). Normalization was achieved using GAPDH antibody (1:5000, cat#sc32233, Cruz Biotechnology, Dallas, TX, USA). Membranes were developed with ECL Western blotting substrate (Pierce, Rockford, IL, USA) using the Fujifilm LAS-3000 developer (Stamford, CT, USA). Integrated density of immunoreactive bands was measured using Fiji software (ImageJ).
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2

Hippocampal Protein Expression Analysis

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The hippocampi were homogenized in a pro-prep solution (17081, iNtRon, Gyeonggi-do, Korea) after physically mincing. The protein concentration was quantified using the Bradford reagent (Bio-Rad, Hercules, CA, USA), and then denatured by boiling for 5 min, depending on the concentration of the sample. Each sample was separated by electrophoresis on 10–15% sodium dodecyl sulfate-polyacrylamide gels. Then, the proteins were transferred to a nitrocellulose membrane and blocked for 30 min with 5% bovine serum albumin (BSA) solution for nonspecific blocking. Membranes were incubated at 4 °C with anti-6E10 (1:1000, Sig-39320, Covance), anti-ADAM10 (1:1000, ab1997, Abcam, Cambridge, UK), anti-BACE (1:1000, sc-33711, Santa Cruz Biotechnology, Dallas, TX, USA), anti-GFAP (1:1000, ab53554, Abcam), anti-Iba1 (1:1000, ab15690, Abcam), or anti-β-actin (1:3000, #3700, Cell Signaling, Danvers, MA, USA). After overnight incubation, membranes were washed thoroughly in PBS-T buffer and incubated for 1 h with the corresponding secondary antibody diluted at 1:3000. The membranes were then washed, and immunoreactivity was detected using an enhanced chemiluminescence (ECL) kit (NEL105001EA, Perkin Elmer, Waltham, MA, USA).
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3

Preparation of Monomeric and Oligomeric Aβ42

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Monomeric and oligomeric Aβ42 were prepared as described previously [36 (link)], from aliquots of the same batch of Aβ42. For oligomeric Aβ42, lyophilized Aβ42 aliquots (0.3 mg) were dissolved in 0.2 ml of 1,1,1,3,3,3-Hexafluoro-2-propanol (HFP, Sigma–Aldrich) and then added to 0.7 ml H2O. Samples were loosely capped and stirred on a magnetic stirrer under a fume hood for 48 h, and used within 36 h. Monomeric Aβ42 was prepared immediately before use by rapidly evaporating the HFP via gentle bubbling of nitrogen gas into the solution. The quality of Aβ42 preparations was checked by immunoblot with anti-A-11 (1:1000, Invitrogen) and anti-6E10 (1:1000, Covance, Princeton, NJ) antibodies.
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4

Western Blot Analysis Protocol

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Western blot analysis was carried out according to a previously described protocol68 (link). Briefly, the cells were lysed in RIPA buffer (20 mM Tris-Cl pH 7.4, 1 mM EDTA, 150 mM NaCl, 1% Triton X-100, 1 mM EGTA, 1 μM Na3VO4, 2.5 mM sodium pyrophosphate, 1 mM phenylmethylsulfonyl fluoride, 1 μg/ml leupeptin,). The protein concentration was calculated using the BCA Protein Assay Reagent (BioRad, Hercules, CA, USA). Protein samples were separated by SDS-PAGE and transferred to polyvinylidene difluoride (PVDF) membranes (Millipore, Bedford, MA, USA). The membranes were incubated at 4 °C overnight with primary antibodies followed by horseradish peroxidase (HRP)-conjugated goat anti-rabbit IgG (1:5,000; Pierce; Carlsbad, CA, USA). The primary antibodies used were anti-6E10 (1:1000; Covance (Princeton, NJ, USA)), anti-mHttQ (1:1000; Cell Signaling (Danvers, MA, USA)), and anti-β-actin (1:5000; Sigma). All membranes were visualized using a UVP Autochemi Darkroom Imaging System (Utra-Violet Products Ltd. UK) and Immobilon Crescendo Western HRP Substrate or Luminata Forte Western HRP Substrate (Millipore, USA).
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5

Western Blot Analysis of Alzheimer's Markers

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Western blotting analysis was performed as described previously (45 (link)). The following antibodies were used: mouse monoclonal anti-6E10 (recognizes Aβ and sAPPα; SIG-39320, Covance), rabbit polyclonal anti-Iba1 (019-19741, Wako), rabbit polyclonal anti-GFAP (Z0334, Dako), rabbit polyclonal anti-APP (recognizes APPfl, CTFα, and CTFβ; #2452, Cell Signaling Technology, Cambridge, MA, USA), rabbit monoclonal anti-nicastrin (#5887, Cell Signaling Technology), rabbit monoclonal anti-PEN2 (#5887, Cell Signaling Technology), rabbit monoclonal anti-PS2 (#5887, Cell Signaling Technology), rabbit monoclonal anti-BACE (#5606, Cell Signaling Technology), sheep polyclonal anti-Trem2 (AF1729, R&D Systems, Minneapolis, MN, USA), mouse polyclonal anti-GPR34 (ab169455, Abcam, Cambridge, MA, USA), mouse monoclonal anti-MerTK (#9178S, Cell Signaling Technology), goat polyclonal anti-P2Y6 (Sc-15217, Santa Cruz Biotechnology, Santa Cruz, CA, USA), and mouse monoclonal anti–β-actin (66009-1-lg, Proteintech, Wuhan, China).
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6

Immunoblotting of Soluble Protein Fractions

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Soluble fractions were probed with (1:1000) mouse monoclonal anti-6E10 (Covance SIG-39320), (1:1000) rabbit polyclonal anti-Aβ42 (Covance SIG-39153), (1:1000) rabbit monoclonal anti-AT180 (Cat. #151559, Abcam, Cambridge, Cambridgeshire, England), (1:1000) rabbit polyclonal anti-Beclin-1 (Cat. #D40C5, Cell Signaling Technology, Danvers, Massachusetts, USA), (1:1000) rabbit polyclonal anti-Atg7 (Cat. #D12B11, Cell Signaling Technology), (1:1000) rabbit polyclonal anti-Atg12 (Cat. #D88H11, Cell Signaling Technology), (1:1000) rabbit polyclonal anti-LC3B (Cat. #PA1-16931, Invitrogen Inc.), α-syn (Cat. #Ma1-12874, ThermoFisher, Waltham, Massachusetts, USA), and (1:1000) rabbit polyclonal anti-actin (Cat. #MAB1501R, Millipore, Burlington, Massachusetts, USA).
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