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46 protocols using ctb 488

1

Retrograde and Anterograde Neuronal Tracing

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Rats were deeply anesthetized with isofluorane and placed in a stereotaxic frame. For retrograde tracing from individual brain regions, a 3% solution of Fluorogold (FG; Fluorochrome LLC, Englewood, CO) was iontophoretically deposited through glass pipettes with tip diameters of 20–30 μm, using pulsed+1.5 μA current 7 seconds on/off for 15 minutes); in two other rats, FG was delivered using +5.0 μA current. In other cases, 100–300 nl of a 3% FG solution, a 1% solution of cholera toxin B subunit (CTb), or a 1% CTb solution conjugated to AlexaFluor-555 (CTb-555; Molecular Probes, Carlsbad, CA) was pressure injected. A summary of the cortical areas targeted, the modes of tracer delivery, and the tracers used can be found in Table 1. For double retrograde injections, four rats received either 200-nl injections of FG and CTb or 200-nl injections of CTb-555 and CTb conjugated to AlexaFluor-488 (CTb-488; Molecular Probes) into two separate cortical locations. An additional three rats received an anterograde/retrograde double injection, which consisted of a volume of 200 nl of a 15% solution of 10,000 MW biotinylated dextran amine (BDA; Life Technologies, Grand Island, NY) pressure injected into the left anterior cingulate cortex (ACC) and 200 nl of FG or CTb-488 pressure injected into the right ACC.
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2

Retrograde Labeling of Retinal Ganglion Cells

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To retrogradely label RGCs, adult mice were anesthetized with ketamine/xylazine (100/10 mg/kg i.p.) and placed in a stereotaxic frame. A small incision was made in the scalp to expose the skull and a focal craniotomy was performed with a microdrill. A Hamilton syringe with 33 gauge needle attached to a Quintessential Stereotaxic Injector (Stoelting, Wood Dale, IL, USA) was lowered into the SC at an angle of 30° to the vertical and to a depth of 1–1.5 mm. Approximately 1 μL of fluorescently-conjugated cholera toxin subunit B (CTB-488, Invitrogen; 10 mg/mL in PBS) was injected at a rate of 0.5 mL/min. The scalp was sutured and mice were allowed to recover in their home cage on a warming plate. After 2 days, mice were sacrificed and intracardially perfused with PBS and PFA. Eyes were dissected out and prepared for imaging as described above.
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3

Quantification of Optic Nerve Axons

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RGC axons were anterogradely labeled by intravitreal injection of cholera toxin B conjugated to Alexa 488 or 555 (4 μl, 0.2% CTB-488 or CTB-555, Invitrogen Inc.) 2 days before euthanasia. Nerve sections were observed under an Axiovert 200 M microscope (Zeiss), using a × 40 objective lens. The center of the field was positioned from 0.25 to 2.00 mm from the proximal border of the crush site. At each distance, a blinded observer counted the number of CTB+ axons and measured the width of the nerve, in five longitudinal sections. We estimated the total number of axons at each distance as previously described [5 (link)]. Because there was a reduction in nerve thickness and opacity 240 d.a.c., these nerves were not sectioned but placed in 80% glycerol overnight and imaged under an LSM 710 Microscope (Zeiss).
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4

Stereotaxic viral injections in rodent brains

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Viral injections were performed using previously described procedures6 (link) at the following stereotaxic coordinates: pPVT, –1.34 mm from Bregma, 0.05 mm lateral from midline, and 3.03 mm vertical from cortical surface; CeL, −1.22 mm from Bregma, 2.9 mm lateral from midline, and 4.6 mm vertical from cortical surface; BLA, –1.80 mm from Bregma, 3.4 mm lateral from midline, and 5.4 mm vertical from cortical surface. For pPVT injections we used a 6.5° angle to avoid damage of the superior sagittal sinus. Animals were kept on a heating pad throughout the entire surgical procedures and were brought back to their home cages after 24 h post-surgery recovery and monitoring. Postoperative care included intraperitoneal injection with 0.3–0.5 ml of lactated Ringers solution and metacam (meloxicam, 1–2 mg/kg) for analgesia and anti-inflammatory purposes. All AAVs and the CAV2-Cre were injected at a total volume of approximately 1 μl (except for the monosynaptic rabies viral tracing, see below), and were allowed at least two weeks for maximal expression. For retrograde tracing of amygdala-projecting pPVT cells, CTB-555 or CTB-488 (0.1-0.3 μl, 0.5% in PBS) (Invitrogen) was injected into CeL and BLA and allowed 3-5 days for sufficient retrograde transport.
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5

Visualizing NMDA-induced RGC Axon Projections

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NMDA injected mice (n = 5) and non-injected controls (n = 5) were anesthetized as mentioned previously and 2 μl of cholera toxin B subunit conjugated with Alexa Fluor 488 (CTB-488, Invitrogen, CA, USA) was injected intravitreally to track the RGC axonal projections. Three to four days after injection, the retina and brain were fixed by perfusing with 4% Paraformaldehyde (PFA). The brain samples were dissected and coronal sections were taken for further analysis. RGC axonal targets in the brain such as Suprachiasmatic Nuclei (SCN), Lateral Geniculate Nuclei (LGN) and Superior Colliculus (SC) were analyzed for RGC axonal projection innervations. The levels of fluorescence of maximum RGC projections in brain regions and total fluorescence levels were measured with ImageJ Software1 as described previously (Karali et al., 2007 (link)).
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6

Mapping V1 to LPl Connectivity

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Three female ferrets were used for tracing studies. To determine the projections from V1 to LPl, anterograde tracer was injected in V1. One animal was microinjected with 0.6 μl of AAV5-CaMKII-ArchT-GFP (7.5 × 1012 vg/ml) in two sites of V1 (8.5 mm and 9 mm lateral from the midline and 3 mm anterior from lambda). To explore the layer-specific connections between V1 and LPl, two different strategies were used. In one animal, AAV5-CaMKII-ArchT-mCherry (1 × 1012 vg/ml) was microinjected (0.3 μl) into LPl (13 mm anterior from lambda and 3.8 mm lateral from the midline) for anterograde labeling of projections in V1. Another animal was injected with 0.4 μl of Alexa 488–conjugated cholera toxin subunit B (2.5μg/μl CTB-488, Invitrogen) into LPl for retrograde labeling of projecting cells in V1. All the injections were conducted using a 1 μL Hamilton syringe with an infusion rate of 0.1μl/min. All viral constructs were packaged and titered by the UNC Vector Core Facility. Adequate pain relief and post-surgery monitoring was provided as described previously (Sellers et al., 2013 (link)). Animals were euthanized for histology 12 days after injection for CTB tracing and nine (ArchT-GFP) and eleven (ArchT-mCherry) weeks after the procedure for viral injections. All procedures were approved by the UNC – Chapel Hill IACUC and exceed the guidelines set forth by the NIH and USDA.
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7

Retrograde Tracing of Fat Pads and Skin

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For injection into the iWAT, a lateral incision was made on the flank skin of each side. For injection into the eWAT, a lateral incision was made on the lower abdominal wall. For injection into the iBAT, a midline incision was made in the interscapular region. For injection into the skin, an intradermal injection was performed. A Hamilton syringe with a 31G (point type 2) needle was used for all retrograde tracing. A total of 4–5 μl 0.1% CTB-488 or CTB-647 (Invitrogen) in PBS was injected per fat pad (2 μl for iBAT) or the flank skin with 8–15 injections to spread out the tracer. The abdominal wall (for eWAT injection) and skin (for iWAT, eWAT or iBAT injection) were sutured separately. Tissues were taken 3–5 days after injection to allow the dye to reach the DRG soma.
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8

Tracing Rat Eye-Brain Connectivity

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Retrograde and anterograde tracings were performed to
investigate the rat eye-brain connectivity in each group, 60
days after injection. Retrograde tracer DiIC18 (DiI, Molecular
Probes, UK) was injected into the superior colliculus of the
rats to label retina-projecting neurons. Cholera Toxin B,
conjugated to Alexa488 (CTB-488, Invitrogen Inc., USA),
was injected as anterograde tracer into the vitreous body
for tracing visual cortex-originating nerves. In 5-7 days, the
samples were collected and processed as described in the
previous publications (18 (link)). The left eyes from the intact,
vehicle, and EPO groups received 2 µl of DiI in the superior
colliculi or 3 µl of toxin in the vitreous, while the right eyes
were intact (n=4 for each group). The 8 µm longitudinal slices
of optic nerves were imaged using a fluorescent microscope
(IX71, Olympus, Japan).
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9

Versatile Viral Tools for Neural Manipulation

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Virus used in the current study were purchased from Taitool company: AAV1-syn-Cre (S0278); AAV1-syn-Flp (S0271); AAV2/9-hEF1a-DIO-hChR2(H134R)-mCherry (S0170); AAV2/9-hEF1a-DIO-hChR2(H134R)-EYFP (S0199); AAV2/8-hEF1a-DIO-EYFP (S0196); AAV2/9-hEF1a-DIO-eNPHR3.0-mCherry (S0197); AAV2/9-CAG-DIO-EGFP-2A-TeNT (S0235); AAV2/9-hEF1a-fDIO-ChrismonR-mCherry (S0384); AAV2/9-hsyn-FLEX-Gcamp6s (S0226); AAV2/9-hEF1a-DIO-eNPHR3.0-mCherry (S0178); AAV2/9-hEF1a-DIO-eNPHR3.0-EYFP (S0852). The titer of AAV1-syn-Cre virus is above 1 × 1013 GC/mL, while the titer of other viruses ranges from 2 to 5 × 1013 GC/mL. We used CTB-488 (Invitrogen™,C34775), CTB-555 (Invitrogen™,C34776) and CTB-647 (Invitrogen™,C34778) at 1 mg/mL. Morphine was purchased from China National Accord Medicines and naloxone was purchased from Sigma-Aldrich.
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10

Intraocular Injection of Fluorescent Tracers

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We adopted procedures previously described for intraocular injection54 (link),55 (link). At P14, mice were anesthetized with isoflurane and put under a dissecting microscope to ensure clear visibility of the tips of glass micropipettes. Penetrating the cornea by inserting glass micropipettes into the juncture of cornea and sclera, 1 µl of 1 mg/ml CTB-488(Invitrogen, C34775) and 1 µl of 1 mg/ml CTB-594 (Invitrogen, C34777) were injected into either eye. To avoid leakage, each intraocular injection persisted at least one minute and micropipette held for one extra minute before withdrawal.
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