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26 protocols using anti α smooth muscle actin α sma

1

Immunohistochemical Analysis of Tissue Markers

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Paraffin sections were dewaxed and hydrated with xylene and gradient alcohol. After that, the sections were heated for antigen retrieval. The endogenous peroxidase was inactivated with 3% H2O2 solution after cooling to room temperature (only immunohistochemistry). Ten percent normal goat serum was used for 30 minutes at room temperature to block the antigen, and the primary antibody was incubated overnight at 4°C. Biotinylated secondary antibody (Zhongshan Biology Co. Ltd, China) was incubated at room temperature for 30 minutes. In the immunohistochemical staining, diaminobenzidine was used for colour development and haematoxylin (Beyotime, China) was used for nuclear staining. Results were taken by a microscope (Olympus, Japan). The positive results were quantified by ImageJ software, and at least three sections were randomly selected for each group. Five different high‐power field of view were randomly selected from each slice for calculation and statistics.
The primary antibody used is as follows: anti‐α‐smooth muscle actin (α‐SMA) (1:150, Abcam, UK); anti‐transformation growth factor‐β (TGF‐β) (1:200, Abcam, UK); anti‐vamentin (1:200, Abcam, UK).
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2

Immunohistochemical Analysis of Liver Fibrosis

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Paraffin-embedded liver sections (3 μm   thick) were deparaffinized in xylene and rehydrated with graded ethanol dilutions. Antigen retrieval was performed at high temperature under high pressure in sodium citrate buffer (10 mM, pH = 6.0) for 20 min. After blocking with H2O2 and 10% goat serum, the sections were incubated with anti-collagen I (1:200, Abcam, United Kingdom) or anti-α-smooth muscle actin (α-SMA, 1:200, Abcam) overnight at 4°C followed by incubation with biotin-streptavidin-horseradish peroxidase (HRP) detection system (ZSGB-BIO, Beijing, China) at room temperature. Finally, the sections were stained with a solution of 3, 3’-diaminobenzidine (DAB, ZSGB-BIO) and counterstained with hematoxylin.
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3

Protein Expression Analysis by Western Blot

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Proteins were extracted from the cultured cells using Complete Lysis-M buffer (Roche, Switzerland). Equal amounts of protein (10 μg) were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, transferred to a polyvinylidene difluoride filter (ATTO) and hybridized with the following antibodies: anti-FABP4 (Abcam, Cambridge, UK), anti-α smooth muscle actin (αSMA, Abcam), anti-AKT, anti-phospho-AKT (P-AKT, Ser473), anti-ERK1/2, anti-phospho-ERK1/2 (P-ERK1/2, Thr202/Tyr204), or anti-beta-actin (Cell Signaling). The bands were quantified using CS Analyzer (2.0) software (ATTO). Western blots experiments were performed three times.
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4

Immunohistochemical Analysis of Angiogenic and Inflammatory Markers

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The paraffin sections were deparaffinized, rehydrated, blocked and incubated with the primary antibody at 4°C overnight. Then, the sections were incubated with biotinylated goat-anti-rabbit IgG antibody (Zhongshan Biology Co. Ltd, China) for 15 minutes at room temperature and subsequently incubated with avidin peroxidase reagent (Zhongshan Biology Co. Ltd, China). Afterward, the counterstaining was carried out with hematoxylin (Beyotime, China) and observed using a microscope. The primary antibodies were as follows: anti-CD31 (1:100, Abcam, UK), anti-α-smooth muscle actin (α-SMA) (1:150, Abcam, UK), anti-vascular endothelial growth factor A (VEGFA) (1:100, Abcam, UK), anti-interleukin 17A (IL-17A) (1:500, Abcam, UK), anti-interferon γ (IFN-γ) (1:100, Abcam, UK), anti-transformation growth factor-β (TGF-β) (1:200, Abcam, UK).
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5

Histological Analysis of Atrial Tissue

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Atrial samples were fixed in 4% paraformaldehyde, embedded in paraffin, and then sectioned (5 μm). The staining of Hematoxylin and eosin (H&E) and Masson’s Trichrome were performed on the atrial sections in accordance with the standard procedure (Li et al., 2018 (link), 2019 (link); Zhang et al., 2020 (link)). The immunohistochemistry staining was performed with anti-α-smooth muscle actin (α-SMA) (1:200, Abcam, MA, United States) and anti-Mac-2 (1:200, Abcam) as described (Wang et al., 2018 (link)). Cryosections were stained with the dihydroethidine (DHE, 1 μM in PBS) for 30 min at 37°C. Fluorescence was detected using Nikon Labophot 2 microscope (Nikon, Tokyo, Japan).
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6

TGF-β1, AA, and SSBE effects on NRK-52E cells

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NRK-52E cells were cultured with TGF-β1, AA, and/or SSBE in 6-well plates at a seeding density of 3×105 cells/well containing glass slides. Cells were washed with phosphate buffered saline (PBS) and fixed in 4% paraformaldehyde (Sigma-Aldrich) at 4°C for 30 min. Following permeabilization with 0.1% Triton X-100 for 10 min, specimens were washed with PBS, and the substrate was blocked with 10% FBS to eliminate nonspecific fluorescence. Immunofluorescence staining was performed using anti-Col3α1 (dilution 1:200), anti-E-cadherin (cat. no. ab53033, dilution 1:400; Abcam, Cambridge, MA, USA), and anti-α-smooth muscle actin (α-SMA; dilution 1:400; cat. no. sc-32251), anti-protein patched homolog 1 (Ptch1; dilution 1:400; cat. no. sc-9016), anti-smoothened (Smo; dilution 1:400; cat. no. sc-13943) and anti-Gli family zinc finger 1 (Gli1; dilution 1:100; sc-6153), purchased from Santa Cruz Biotechnology, primary antibodies at 4°C overnight. Following washing with PBS three times, the cell preparations were incubated with fluorescein isothiocyanate (green)/tetramethylrhodamine-(red) labeled secondary antibodies (dilution 1:2,000; Sigma-Aldrich) for 1 h at room temperature. Following washing with PBS, cell preparations were placed in acacia and covered with a slide. Immunofluorescence studies were semi-quantitatively or quantitatively assessed by two blind independent investigators.
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7

Comprehensive Immunohistochemical Profiling

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Primary antibodies used for immunohistochemical, immunofluorescence, and whole-mount staining included anti-keratin 8 (K8; Progen, Heidelberg, Germany), anti-α-smooth muscle actin (αSMA; Abcam, Cambridge, MA), anti-keratin 77 (K77; Abcam), anti-S100 calcium binding protein A2 (S100A2; Novus Biologicals), anti-CD29 (Abcam), anti-CD49f (Millipore, Milford, MA), anti-platelet endothelial cell adhesion molecule (CD31; Abcam), and anti-protein gene product 9.5 (PGP9.5; Abcam). Secondary antibodies were species-specific horseradish peroxidase (HRP)-conjugated secondary antibodies (Abcam) and species-specific fluorescent dye-conjugated secondary antibodies (Invitrogen, Carlsbad, CA). F-actin was stained with Alexa Fluor 488 and 594 Phalloidin (Invitrogen).
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8

Fer‐1 Modulates Corneal Angiogenesis

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Fer‐1 was obtained from MedChemExpress. Dexamethasone (Dex) was purchased from Meilunbio. Soybean lecithin, cholesterol, and 1,2‐distearoyl‐sn‐glycero‐3‐phosphoethanolamine‐N‐[methoxy (polyethylene glycol)‐2000] (DSPE‐mPEG) were obtained from AVT Pharmaceutical Technology. Green fluorescent protein‐transduced human umbilical vein endothelial cells (HUVEC‐GFP) were obtained from Beyotime. Human corneal epithelial cells (HCECs) were obtained from the ATCC. Calcein‐AM/PI double stain kit was purchased from Yeasen. A Cell Counting Kit‐8 (CCK‐8) was purchased from Dojindo. Recombinant human vascular endothelial growth factor (rhVEGF) was purchased from Peprotech. Matrigel Matrix Growth Factor Reduced was obtained from BD Bioscience. Rabbit anti‐4 hydroxynonenal (4‐HNE), anti‐glutathione peroxidase 4 (GPX4), anti‐acyl‐CoA synthetase long‐chain family member 4 (ACSL4), anti‐CD31, and anti‐α‐smooth muscle actin (α‐SMA) antibodies were purchased from Abcam. Rabbit anti‐IL‐1β and anti‐IL‐6 antibodies were purchased from Affinity Bioscience. PrimeScriptTM RT Master Mix was acquired from Takara. ChamQ SYBR qPCR Master Mix was acquired from Vazyme.
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9

TGF-β1-induced fibroblast activation assay

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Human lung IMR-90 fibroblasts (Korean Cell Line Bank, Korea) were maintained in Dulbecco’s modified Eagle’s medium (ThermoFisher Scientific, Waltham, MA, USA) containing 10% fetal bovine serum and 1% penicillin/streptomycin at 37 °C under 5% CO2 and 95% air. Recombinant human TGF-β1 proteins (240-B) were purchased from R&D Systems (Minneapolis, MN, USA). Antibodies used for protein detection included anti-phospho-SMAD3 (p-SMAD3) (Ser423/425), anti-p-AMP-activated protein kinase α1 (p-AMPKα1) (Thr172) (Cell Signaling Technology, Danvers, MA, USA), anti-CRBN (Merck, Darmstadt, Germany), anti-α-smooth muscle actin (α-SMA) (Abcam, Cambridge, MA, USA), anti-SMAD, anti-GAPDH (Santa Cruz Biotechnology Inc., Santa Cruz, CA, USA), and anti-collagen I (SouthernBiotech, Birmingham, AL, USA) antibodies. Alexa Fluor 488- and Alexa Fluor 555-conjugated antibodies and Hoechst 33342 were purchased from ThermoFisher Scientific. Metformin was obtained from Sigma-Aldrich (St. Louis, MO, USA).
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10

Quantitative Analysis of pPDGFRβ in Kidney Tissue

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As described by Takikita-Suzuki et al[20 (link)], the frozen kidney tissue was homogenized on ice in buffer containing Tris-HCl (20 mmol/L; pH 7.5), ethylenediamine tetraacetic acid (1 mmol/L), NaCl (140 mmol/L), Nonidet P-40 (1%), aprotinin (50 μg/mL), NaF (50 mmol/L), sodium orthovanadate (1 mmol/L) and phenylmethyl sulfonyl fluoride (1 mmol/L). Homogenized tissue was centrifuged for 30 min at 15000 rpm at 4 °C. Supernatant was collected and protein concentrations were measured using the method of Bradford. After 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis, the protein was transferred to a nylon membrane (Amersham Pharmacia Biotech, Buckinghamshire, England, United Kingdom). Blocking was performed for 2 h in phosphate-buffered saline (PBS) solution containing 5% (w/v) skim milk, followed with incubation with anti-α smooth muscle actin (α-SMA; Abcam) or anti-pPDGFRβ (Antibody #3161, Cell Signaling) antibodies, followed by an appropriate HRP-conjugated secondary antibody (Cell Signaling). Proteins were detected using an enhanced chemiluminescence kit (Amersham/GE Healthcare, United Kingdom). Densitometric analysis for pPDGFRβ was performed with normalization to GAPDH.
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