The largest database of trusted experimental protocols

7 protocols using one shot bl21 star

1

Recombinant Protein Expression in E. coli

Check if the same lab product or an alternative is used in the 5 most similar protocols
One Shot®BL21 Star™ (DE3; Invitrogen) bacteria were transformed with plasmids encoding the scProtein of interest and plated on LB agar plates with appropriate antibiotic (kanamycin 50 µg/mL, Sigma). After overnight incubation at 37 °C, a medium sized, isolated colony was picked and inoculated into a 5 mL overnight seed culture of LB media. The seed culture was diluted 1:20 and grown in 2xYT media (Sigma) supplemented with 0.2 um filtered 40 mM MgSO4 (Sigma), 2.5 mM KCl (Sigma), and 20 mM glucose (Sigma) until obtaining OD600 ~0.1–0.3 and then, for protein expression, the bacteria were induced by adding 0.5 mM isopropyl β-d-1-thiogalactopyranoside (IPTG; Sigma) and incubated overnight at 37 °C. Cultures were harvested by centrifugation at 3000 × g for 10 min and pellets stored at −80 °C or processed immediately.
+ Open protocol
+ Expand
2

E. coli Bacterial Protein Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
One Shot BL21 Star (DE3) Chemically Competent E. coli (Invitrogen Cat#C601003) and Rosetta 2(DE3) Singles Competent Cells-Novagen (Cat#71400) were used in this study for expression of GST-tagged proteins. Bacterial cultures were grown in the Luria Broth (LB) medium supplemented with ampicillin or ampicillin and chloramphenicol, respectively.
+ Open protocol
+ Expand
3

Purification of 6xHis-tagged Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
PRL full length protein sequences fused to an N-terminal 6xHis-tag was cloned into pET28b bacterial expression vector. Proteins were expressed in One Shot BL21 Star bacteria (Invitrogen, Cat # C601003) by induction with 0.5 mM IPTG (Fisher Scientific, Cat # BP175510) for 16 h. Cells were resuspended in 10 ml of lysis buffer [300 mM NaCl (VWR Cat. No. BDH9286), 20 mM Tris pH 7.5, 10 mM Imidazole pH 8.0 (Sigma-Aldrich I2399), 1:1000 protease inhibitor cocktail (Sigma-Aldrich Cat. No. P8465)] per gram of cell pellet and lysed using a microfluidizer (Avestin, EmulsiFlex-C5). Protein was isolated using Ni–NTA Resin (VWR, Cat # 786–940) and eluted with 2 mL of elution buffer (300 mM NaCl, 20 mM Tris pH 7.5, and 250 mM Imidazole pH 8.0). Following cleavage with TEV protease, samples were reapplied to Ni–NTA column to remove uncleaved protein as well as TEV. Samples were further purified using an S200 column on a Superdex 10/300 in buffer containing 100 mM NaCl and 200 mM HEPES pH 7.5. Purified fractions were then run on 4–20% Mini-PROTEAN TGX Stain-Free (Bio-Rad). The purest fractions were pooled, concentrated together, flash frozen and stored at -80 °C.
+ Open protocol
+ Expand
4

Cloning and Expression of Isotopically Labeled DnaB

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protein was cloned into the vector pACYC-duet1 (using the forward primer 5’-agtcatatggatcatttaaagcatttgcag-3’ containing a NdeI restriction site and reverse primer 5’-atactcgagttcaagttgtaactatatcataatcc-3’ containing a XhoI site), and expressed in the E. coli strain BL21 Star (DE3) (One Shot® BL21 Star™ (DE3) Chemically Competent E. coli, Invitrogen™)53 (link). Natural abundance and 13C–15N labeled HpDnaB was prepared in buffer A (2.5 mM sodium phosphate, pH 7.5, 130 mM NaCl) as described in ref. 53 (link). In short, DnaB was recombinantly expressed in presence of 13C-glucose (2 g/L) and 15N-ammonium chloride (2 g/L) as sole sources of carbon-13 and nitrogen-15. In case of the deuterated protein, the protein was expressed in D2O in presence of deuterated 13C-glucose. The back-exchange was achieved by purifying the protein in a protonated buffer (2.5 mM sodium phosphate, pH 7.5, 130 mM NaCl).
+ Open protocol
+ Expand
5

Overexpression and Purification of 13C-15N-Labeled HpDnaB

Check if the same lab product or an alternative is used in the 5 most similar protocols
The protein was cloned into the vector pACYC-duet1 (using the forward primer 5’-agtcatatggatcatttaaagcatttgcag-3’ containing a NdeI restriction site and reverse primer 5’-atactcgagttcaagttgtaactatatcataatcc-3’ containing a XhoI site)7 (link), and expressed in the E. coli strain BL21 Star (DE3) (One Shot® BL21 Star™ (DE3) Chemically Competent E. coli, Invitrogen™). The overexpression was performed in M9 minimal medium39 (link) using 13C-enriched glucose 2 g L−1 (Cambridge Isotope Laboratories, Inc. CLM-1396-PK) and 15N-enriched ammonium chloride 2 g L−1 (Sigma-Aldrich® 299251) as sole carbon and nitrogen sources. The cells were lysed by a microfluidization process. 13C-15N labelled HpDnaB was purified by heparin-agarose affinity chromatography using a 5 mL HiTrap Heparin HP column (GE Healthcare Life Sciences) followed by anion exchange chromatography using a 5 mL HiTrap Q HP column (GE Healthcare Life Sciences). The purified protein was concentrated up to 30 mg mL−1 by centrifugation in buffer A (2.5 mM sodium phosphate, pH 7.5, 130 mM NaCl). For more details see ref. 37 (link).
+ Open protocol
+ Expand
6

Recombinant expression and purification of hIDO1

Check if the same lab product or an alternative is used in the 5 most similar protocols
hIDO1 (EC 1.13.11.52) was overexpressed in One Shot BL21 Star (DE3) chemically competent E. coli cells (Invitrogen) using a published procedure.38 (link) Greater than 95% homogeneity of hIDO1 was confirmed by the SDS-PAGE after the second Ni-affinity column and dialysis into 50 mM Tris•HCl pH 8.0 buffer, containing 100 mM NaCl and 4 mM EDTA. The purified enzyme exhibited an [M+H]+ peak at m/z = 45,586 on a Microflex LRF MALDI-TOF mass spectrometer (Bruker), which is in good agreement with the expected value of m/z = 45,643. Cytochrome b5 and cytochrome b5 reductase, overexpressed in One Shot BL21 Star (DE3) cells, were purified as described elsewhere.39 (link),40 The homogeneity of these proteins was confirmed by 10% SDS-PAGE analysis. Protein concentrations were determined spectrophotometrically. All enzyme stocks were stored at –75 °C.
+ Open protocol
+ Expand
7

Isotopic Labeling of H. pylori DnaB Helicase

Check if the same lab product or an alternative is used in the 5 most similar protocols
The NTD, CTD and the full-length (FL) protein of the H. pylori helicase DnaB were as previously described cloned into the plasmid pET151 (Wiegand et al. 2016) , pET101 (Stelter et al. 2012 ) and pACYC-duet1 (Bazin et al. 2015) , respectively, and expressed in the E. coli strain BL21 Star (DE3) (One Shot ® BL21 Star™ (DE3) Chemically Competent E. coli, Invitrogen™). The overexpression of these three proteins was performed in M9 minimal medium (Studier 2005 ) using 13 C-enriched glucose 2 g.L -1 (Cambridge Isotope Laboratories, Inc. CLM-1396-PK) and 15 N-enriched ammonium chloride 2 g.L -1 (Sigma-Aldrich ® 299251) as sole carbon and nitrogen sources. The cells were lysed by microfluidization process.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!