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8 protocols using sc 81417

1

Western Blot Analysis of EMT Markers

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Cells were lysed in ice-cold RIPA buffer and protein concentrations were determined using the DC Protein Assay Kit (BioRad). Incubation with primary antibodies against ZEB1 (1:2000, Sigma #HPA027524), CHKα (1:500, Abcam #ab88053), TWIST1 (1:100, Santa Cruz #sc-81417), β-actin (1:1000, Santa Cruz #sc-130657) and α-tubulin (1:10000, Sigma #T9026) was performed overnight at 4°C on a 3D-shaker in 5% milk powder (Carl Roth) in TBST. As secondary antibodies we used goat-anti-rabbit IRDye800CW (1:10000, LI-COR #926-32211), goat-anti-mouse IRDye680RD (1:10000, LI-COR #926-68070) and goat anti-rabbit-HRP (1:10000, Jackson Immuno Research #111-035-144) diluted in blocking solution and incubated for 1 h at room temperature. Signal detection was performed either on a film based system by applying Super Signal West Pico Chemiluminescent Substrate (Thermo Scientific) or on a luminescence based system in a LI-COR Odyssey CLx Imager (LI-COR). Densitometry was done using supplied software from LI-COR or ImageJ software [75 (link)]. Densitometry values for ZEB1 and CHKα were normalized to the corresponding alpha tubulin values, TWIST1 was normalized to beta actin.
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2

EMT Markers and STC2 Expression

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The expression of STC2 and EMT markers was observed in cultured EMT cells by an immunofluorescence microscopy. Cells grown on coverslips, which were performed in a 96-well plate, were fixed with paraformaldehyde for 30 min. After fixation, cells were washed with TBST twice and blocked in 1.5% BSA/TBST for 1 h at room temperature. Cells were respectively incubated with primary antibodies against STC2 (1:500, sc-14350, Santa Cruz), vimentin (1:500, sc373717, Santa Cruz), E-cadherin (1:500, sc-31021, Santa Cruz), N-cadherin (1:500, sc-31031, Santa Cruz) and twist (1:500, sc-81417, Santa Cruz) overnight at 4°C. Then cells were incubated with TRITC-conjugated secondary antibodies (ZF-0313, ZSGB-BIO) and FITC-conjugated ones (ZF-0314, ZSGB-BIO) for 1 h and stained with DAPI for 5 min. The images were viewed and recorded by Olympus BX40 and SPOT Flex (Diagnostic Instruments, Version 4.5).
To block ERK, PI3K signaling, 10 μM ERK inhibitor U0126 (#S1901, Beyotime) or 10 μM PI3K inhibitor LY294002 (#9901, Cell Signaling Technology) was respectively incubated with NCM460, EMT cells for 24 h to directly observe expression strength of STC2 and EMT markers. Other procedures were same as the above.
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3

Western Blot Analysis of EMT Markers

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Several target proteins were detected their expression by Western blot. Proteins were separated on a 12% SDS-PAGE gel and transferred onto a PVDF membrane at 100 V for 1 h. The specific primary antibodies, including vimentin (1:500, sc373717, Santa Cruz), E-cadherin (1:500, sc-31021, Santa Cruz), N-cadherin (1:500, sc-31031, Santa Cruz), twist (1:500, sc-81417, Santa Cruz), STC2 (1:500, sc-14350, Santa Cruz), ERK (1:500, sc-292838, Santa Cruz), MEK (1:500, sc-436, Santa Cruz), p-ERK (1:500, sc- 136521, Santa Cruz), p-MEK (1:1000, 9121, Cell signaling), Akt (1:1000, 4961, Cell signaling) and phospho Akt (1:1000, 2118–1, Epitomics), were diluted in TBST buffer (50 mM Tris–HCl, with 150 mM NaCl, 0.1% Tween-20, pH 7.4) to incubate PVDF membrane at 4°C overnight. The corresponding secondary antibodies, conjugated horseradish peroxidase, were subsequently incubated with the PVDF membrane at 37°C for 1 h. Signal detection was performed with HRP substrates (WBLUR0100, Millipore). The detection of GAPDH against its antibody (1:1000, sc- 365062, Santa Cruz) was taken as a control.
For serum STC2 detection, the high abundant serum albumin and IgG was removed by using a reagent kit (ProteoExtract Albumin/IgG Removal Kit, 122642, Calbiochem, San Diego, CA) [38 (link)]. Reversible Ponceau staining was used as a loading control.
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4

Western Blot Analysis of EMT Markers

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Total protein was extracted in cells or kidney tissue using RIPA (Beyotime Biotechnology, Shanghai, China) and quantified using the BCA (Thermo Scientific, Waltham, MA, USA) assay kit. Equal amounts of protein from each sample were electrophoresed on 10% Tris-glycine sodium dodecyl sulfate-polyacrylamide gels, and western blots were transferred to 0.45-mm polyvinylidene fluoride membranes (Millipore, Darmstadt, Germany). Membranes were blocked with TBST containing 5% nonfat dry milk for one hour at room temperature and then incubated with primary antibodies against mouse fibronectin (ab45688, ABCAm), vimentin (5741 P, CST), N-cadherin (22018-1-AP, ProteinTech), β-catenin (ab32572, ABCAm), snail (3879 P, CST), twist (sc-81417, Santa Cruz) or GAPDH (#5174, CST) overnight at 4 °C, followed by incubating with a horseradish peroxidase-conjugated secondary antibody. Densitometric analysis results were standardized as GAPDH expression and expressed as fold change relative to those of negative control.
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5

Western Blot and Immunoprecipitation Protocols

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Cell lysates for Western blot were collected in RIPA lysis buffer containing protease inhibitor cocktail (Thermo, 78443) for 30 min on ice and centrifuged at 13,200g for 10 min at 4°C to obtain supernatant. Protein quantification was performed with the Bradford Protein Assay Kit (Thermo, 23236). For immunoprecipitation of targeted proteins, the supernatants of collected samples were incubated with the corresponding antibody and protein A/G magnetic beads or with anti‐DYDDDDK (MBL, M185‐11) and anti‐HA (MBL, M180‐11) magnetic bead antibodies at 4°C overnight. Then, the beads were separated by a magnetic device. Cell proteins were separated by SDS‐PAGE electrophoresis followed by transfer to PVDF membranes (Millipore, ISEQ00010). After blocking with 5% skim milk (BD Difco, 232100) in Tris‐buffered saline containing 0.5% Tween 20 for 1 h, the membranes were incubated with the corresponding antibodies overnight. The targeted proteins were visualized by an enhanced chemiluminescence (ECL) detection kit (NCM Biotech, P10300) after incubation with horseradish peroxidase‐conjugated antibodies. The primary antibodies included HK2 (Abcam, ab104836), TJP1 (Abcam, ab216880), E‐cadherin (CST, 3195), vimentin (CST, 5741), Twist1 (Abcam, ab175430 and Santa Cruz, sc‐81417), β‐actin (CST, 4970S), anti‐Flag (CST, 14793), anti‐HA (CST, 3724S) and ubiquitin (CST, 3936T).
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6

Immunofluorescent Identification of CTCs

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CTCs were fixed in 4% paraformaldehyde, permeabilized with phosphate buffered saline (PBS) plus 0.2% Triton X-100 and blocked for 60 min with 1% bovine serum albumin in PBS. Mouse anti-human pan-cytokeratin (C11) Ab (1:50, sc-8018, Santa Cruz Biotechnology, Heidelberg, Germany), anti-human CD45 Ab (1:50, #13917, Cell Signaling Technology, Danvers, MA, USA), anti-human TWIST1 Ab (1:50, sc-81417, Santa Cruz Biotechnology), anti-human EGFR (1:50, sc-373746, Santa Cruz Biotechnology), anti-human TRPM4 (1:50, HPA041169, Sigma Aldrich, St. Louis, MO, USA), and anti-human ZEB1 (1:50, sc-515797, Santa Cruz Biotechnology), followed by corresponding IgG Abs (Alexa Fluor® 594, 1:100, Abcam, Cambridge, UK) were used to stain the CTCs. PureBluTM DAPI (#1351303, BioRad) labeled the nuclei. C2 Plus confocal laser scanning microscope (Nikon Instruments, Firenze, Italy) and NIS Element Imaging Software (Nikon Instruments) were used for the acquisition and processing of data. Epithelial CTCs required having a DAPI-positive nucleus with a diameter of 4 μm, cytokeratin staining surrounding 50% of the nucleus, and no CD45 expression.
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7

Antibody Source and Specificity

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Antibodies against RelA (sc-372), AR (N-20, sc-816) and Twist1 (sc-81417) were purchased from Santa Cruz Biotechnology. Antibodies against phosphorylated RelA Ser536 (p-RelA, #3033), phosphorylated PKC Ser660 (βII) (p-PKC; #9371), phosphorylated STAT3 Ser727 (p-STAT3 Ser727 ; #9134) and STAT3 (#4904) were purchased from Cell Signaling Technology. Anti-PKC (SAB4502356), HIF-1α (HPA001275) and anti-β-actin (A3854) antibodies were obtained from Sigma-Aldrich.
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8

Antibody Characterization for Prostate Cancer

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Antibodies against AR (N-20, sc-816) which recognizes N-terminus of AR protein and Twist1 (sc-81417) were purchased from Santa Cruz Biotechnology. Anti-phosphorylated Smad2/3 (p-Smad2/3; #8828) and anti-Smad2/3 (#8685) antibodies were obtained from Cell Signaling Technology (Cambridge, MA, USA). Antibodies against E-cadherin (#610181), N-cadherin (#610920), fibronectin (#610077), and vimentin (#550513) were purchased from BD Biosciences. Anti-b-actin (A3854) and anti-AR V7 (AG10008) antibodies were obtained from Sigma-Aldrich and Precision Antibody (Columbia, MD, USA) respectively. Anti-AR V7 (AG10008) antibody from Precision Antibody was utilized only for blotting AR V7 while anti-AR antibody (N-20) from Santa Cruz Biotechnology was utilized for blotting full-length AR and AR splice variants (AR-Vs) in all other experiments. TGF-b inhibitor SB525334 was obtained from Sigma-Aldrich.
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