The largest database of trusted experimental protocols

3 protocols using ab226198

1

Quantitative Analysis of Smad Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole-cell lysates were harvested with 200 μl of RIPA Lysis and Extraction Buffer (Thermo Fisher Scientific). Cytoplasmic and nuclear extracts were prepared with NE-PER™ Nuclear and Cytoplasmic Extraction Reagents (Thermo Fisher Scientific). Western blots were performed by standard procedures using antibodies for Smad1 (1:1000 dilution, #9743, Cell Signaling Technology), phospho-Smad1/5/9 (1:1000 dilution, #13820, Cell Signaling Technology), β-actin-HRP (1:10,000 dilution, PM053-7, MBL, Japan), Lamin A (1:1000 dilution, ab226198, Abcam), β-tubulin (1:1000 dilution, H-235, Santa Cruz), rabbit IgG–peroxidase (1:20,000 dilution, A0545, Sigma-Aldrich), and S-protein HRP conjugate (1:5000 dilution, 69047, Novagen). The signals were detected by ECL Prime Western Blotting Detection Reagents (RPN2232, GE Healthcare). Quantification was performed using ImageJ software.
+ Open protocol
+ Expand
2

Immunohistochemical Profiling of Cellular Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human paraffin embedded formalin fixed sections (7 μm) were deparaffinized then subjected to antigen retrieval (20 min in pressure cooker in Trilogy pretreatment buffer, Sigma, 920P-05). Sections were blocked in 10% goat-serum buffer, for 1 h at RT. Primary antibodies for CC1 (1:500, Millipore OP80), LMNA (1:1,000, Abcam, ab226198), LMNB1 (1:1,000, Abcam, ab16048), NG2 (1:500, Sigma, MAB5384-I), were incubated for 4 h at RT. After washes, sections were incubated with Alexa fluor conjugated goat secondary antibodies (1:500) for 1 h at RT. After washes, sections were incubated with DAPI (1:1,000) for 5 min. Primary and secondary antibodies used are listed in the key resources table. Slides were mounted with fluorogold mounting medium and imaged at 20x and/or 40x on Zeiss Axio Vert with Apotome 3.
+ Open protocol
+ Expand
3

Co-Immunoprecipitation of Nuclear Envelope Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Co‐immunoprecipitation was performed as described previously.27, 28, 30, 31 Cell lysates were mixed with protein A/G‐magnetic beads (Novex, Oslo, Norway) and incubated at 4°C overnight with the selected antibodies. The beads were washed using Western/IP lysis buffer (Beyotime, Haimen, China, composition: 20 mM Tris [pH 7.5], 150 mM NaCl, 1% Triton X‐100, and inhibitors containing sodium pyrophosphate, β‐glycerophosphate, EDTA, Na3VO4 and leupeptin), and eluted using the Acid Elution buffer (Beyotime). Next, total protein amount of each group was measured by BCA protein quantification. After the first quantification, the samples were diluted according to the difference in protein amount, and the second quantification was carried out for confirmation. Finally, the samples were suspended in SDS‐PAGE loading buffer and then measured by IB. The antibodies used for co‐IP were as follows: anti‐FLAG (CST, #14793 and #8146), anti‐PDHA (Abcam, #ab168379 and #ab110330), anti‐HA (Abcam, #ab9110 and #ab1424), anti‐EMD (Abcam, #ab40688 and #ab204987), anti‐Lamin A (Abcam, #ab226198), anti‐Nesprin1 (Abcam, #ab192234), anti‐Nesprin3 (Abcam, #ab186746), anti‐Sun1 (Abcam, #ab124770) and anti‐Sun2 (Abcam, #ab124916).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!