The largest database of trusted experimental protocols

4 protocols using dimethyloxalylglycine dmog

1

Estrogen and Proteasome Modulation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
All reagents were used as received unless otherwise stated. 17β-estradiol (E2) and MG-132 were purchased from Sigma-Aldrich. Dimethyloxalylglycine (DMOG) was purchased from Frontier Scientific. Cell culture medium and additives were purchased from Gibco, except for collagen I (rat tail, Corning), DMSO (Fisher Scientific), ethanol (Fisher Scientific), and fetal bovine serum (FBS, VWR). CellTiter-Glo, ONE-Glo, and Reporter Lysis 5X Buffer were purchased from Promega and used according to the manufacturer’s protocols.
+ Open protocol
+ Expand
2

PARP-1 Knockout Fibroblast Hypoxia Response

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mouse embryonic fibroblasts NIH3T3 (ATCC‐CRL‐1658) and PARP‐1 knock‐out (PARP1−/−) mouse embryonic fibroblasts (derived from PARP‐1 knock‐out mouse11) cell lines were cultured in high glucose Dulbecco's Modified Eagle's medium (DMEM) supplemented with 10% foetal bovine serum (FBS), L‐glutamine and penicillin/streptomycin (all cell culture reagents were supplied by Biological Industries Israel, Beit Haemek Ltd.). Both cell lines were treated with either 1 mmol/L dimethyloxalylglycine (DMOG) (Frontier scientific, USA) for 24 hours, or with 10 µmol/L L‐ascorbic acid (VitC) (Sigma Aldrich, USA) for 48 hours. These concentrations correspond to the EC50 for the two cell lines.
+ Open protocol
+ Expand
3

Hypoxia Induction and Compound Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cycloheximide (CHX; Sigma-Aldrich) was dissolved in ethanol; desferrioxamine (DFX; Sigma-Aldrich), (+)-sodium l-ascorbate (Sigma-Aldrich), 2-oxoglutarate (Sigma-Aldrich), diethyl 2-oxoglutarate (DE-2OG; Sigma-Aldrich) and iron (II) sulfate (Sigma-Aldrich) in H2O; and dimethyloxalylglycine (DMOG; Frontier Scientific, Logan, UT, USA) and FG-4592 (Roxadustat; Selleckchem, Houston, TX, USA) in dimethylsulfoxide (DMSO, Sigma-Aldrich). Hypoxic incubations were performed using the InvivO2 400 humidified cell culture workstation (Baker Ruskinn, Bridgend, South Wales, UK) operated at 0.2% O2 and 5% CO2 as described previously [29 (link)] or in humidified oxygen-regulated cell culture incubators (Binder GmbH, Tuttlingen, Germany) operated at 1%–8% O2 and 5% CO2. If not otherwise indicated, “normoxia” refers to the standard oxygen concentration in the gas phase within a cell culture incubator at 500 m altitude (18.5% O2) and “hypoxia” to 0.2% O2 [30 (link)].
+ Open protocol
+ Expand
4

Immunoblotting of AMPK pathway proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blotting was performed using antibodies against ACC (Cell Signaling Technologies (CST), ACC2 isoform (CST), actin (Sigma), AMPKα (CST), HA (CST), Flag (Sigma), hydroxyproline (Abcam), phospho-ACC (CST), phospho-AMPKα (CST), PHD3 (Novus Biologicals) and tubulin (Sigma). 1% NP40 buffer containing protease and phosphatase inhibitors was used to prepare lysates, unless otherwise indicated. For ACC hydroxylation time course studies, the pan-PHD inhibitor dimethyloxalylglycine (DMOG, Frontier Scientific, 1 mM) was added to the lysis buffer to prevent further hydroxylation in the lysate. For immunoprecipitation of endogenous ACC2, cells were lysed with buffer containing 50 mM Tris-HCl (pH 7.8), 150 mM NaCl, 1 % NP40, 0.1 mM DTT, 0.05 mM DMOG, protease inhibitors (Roche) and 100 ul of phosphatase inhibitor 2/3 (Sigma). Cell lysates were centrifuged for 15 minutes to remove debris. Then, 2 ug of ACC antibody (CST) or ACC2 antibody (CST), was added to the cleared cell lysate (500 ng of protein) and immunoprecipitated with EZview Red Protein G Affinity resin (Sigma). Transiently overexpressed HA- or Flag-tagged proteins, lysates were immunoprecipitated using EZview anti-HA Affinity resin (Sigma) or anti-Flag Affinity resin (Sigma).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!